Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq18 118 1e-21 >seq18 Length=361580 Score = 118 bits (130), Expect = 1e-21 Identities = 554/868 (64%), Gaps = 20/868 (2%) Strand=Plus/Plus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 ||| || || | |||||||| || | || || || ||||| || || ||||||||| | Sbjct 110678 CATGACACCAGTCTTTTGGTAGTCGGCAACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGC 110737 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880 || || || || |||||||| ||||| || ||||| | || || | || | | | Sbjct 110738 CAGGGAGATGTTCTCCATGAAGTCAAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 110796 Query 41881 CAATTCAGAA-ATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939 | | ||| | || || || |||| ||| || || ||| ||||||| | | Sbjct 110797 CGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 110856 Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999 |||| || | || | ||||| ||| |||| | || || || || || ||| | Sbjct 110857 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGCTGACAG 110916 Query 42000 CGTCTGTTATAATAGATCTT--ACTGT-TTCTTCACTCGGTGGATACAATAAATGTTTAA 42056 | || || || | |||| || | ||||| ||| || | | | ||| | Sbjct 110917 CCTCGGTAATGACG--TCTTGGACGGCCTTCTT-ACTTGGGCGGTGTCTGAGATGGGAGA 110973 Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116 | | | || ||||| || ||| |||||||| || | || | |||||||| | Sbjct 110974 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGA 111033 Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAG 42176 | || || || | ||| ||||||||||| || ||||| || || || || || || || | Sbjct 111034 AGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAACCGG 111093 Query 42177 AAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CAC 42233 | |||||||| || || || || || ||||||| || | || | || || | Sbjct 111094 AGAAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAATCCT 111153 Query 42234 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 42293 | || || |||||| | ||||| ||||||||||| || | ||||| || || || | Sbjct 111154 TATCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGA 111213 Query 42294 TGGCATTAAAGAGATAGtttttttCA--TTACTATCTTTAACATATGTATCGATCAAAAG 42351 ||||||| ||||| || | || | || | || || | ||||| || || | || Sbjct 111214 TGGCATTGAAGAGGTATGTGCGTTGAGCTTGC--TCCTTGATGTATGTGTCAATGAGGAG 111271 Query 42352 ACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGC 42411 || | || | |||||||| || || || || || |||||||| || | ||| Sbjct 111272 GGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGC 111331 Query 42412 CTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTC 42471 || | | ||| || || | | || || || | || ||||| || |||||||| Sbjct 111332 TTCTGGGATCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTC 111391 Query 42472 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA--- 42528 | || || || || || | || || || || || |||| || || | Sbjct 111392 AGACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCGT-CGTCATTGAGGC 111450 Query 42529 -TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATG 42587 || ||||| || | | || || || | ||| | || ||| | ||||| || || | Sbjct 111451 GGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGACG 111510 Query 42588 CTTCTGCCTTTTTATACATATTCCAGAT 42615 |||| ||||| || ||||| | |||||| Sbjct 111511 CTTCCGCCTTCTTGTACATCTGCCAGAT 111538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671135768800840