Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq18 183 4e-41
seq46 138 2e-27
seq71 91.5 2e-13
>seq18
Length=361580
Score = 183 bits (202), Expect = 4e-41
Identities = 376/558 (67%), Gaps = 6/558 (1%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| | || || || ||||| | || ||| | |||||
Sbjct 111538 ATCTGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACAGCAGAGGAGATTGATCTC 111479
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||||| |||| ||| | | || | | ||| ||||| | || || ||
Sbjct 111478 TCCAAGGACCTTCACGACTGGAACAACCGCCTCAATGACGACGAGCGCTACTTCATCTCC 111419
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| || | || ||||| |||| || || ||||| |||||||| || || | ||
Sbjct 111418 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 111359
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258
||| ||| | || ||||| | ||||| ||||| ||||||||||||||
Sbjct 111358 TTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 111299
Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATC---CG 125315
|||||| | ||| | || | ||||| || ||||||| ||||| || | |
Sbjct 111298 GAGAACATTCACGCCGAGACATACTCCCTCCTCATTGACACATACATCAAGGAGCAAGCT 111239
Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375
||||| | | || ||||| || || ||||| || | || | || || |||||
Sbjct 111238 CAACGCACATAC---CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCC 111182
Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435
| |||| || |||||||| | || | | || | | ||| | | || || ||
Sbjct 111181 GACTGGGCAGTTAGGTGGATCCAAGATAAGGATTCCACTTTCGCTCAGCGTCTCGTTGCC 111122
Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495
||||| ||||| ||||| |||||||| || ||| || || |||| || |||||||||
Sbjct 111121 TTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGCTCAAG 111062
Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555
||||| || |||||| | || ||||| | |||||| | || || || ||||||||
Sbjct 111061 AAGCGTGGCCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGT 111002
Query 125556 CTACACTGTGACTTTGCC 125573
|| ||| |||||| |||
Sbjct 111001 CTCCACACTGACTTCGCC 110984
>seq46
Length=214393
Score = 138 bits (152), Expect = 2e-27
Identities = 347/522 (66%), Gaps = 4/522 (1%)
Strand=Plus/Minus
Query 96862 CACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAAC 96921
|| ||||||| ||||| ||||| || || || || || | ||| ||||| | || |
Sbjct 140024 CAAGATACGTCGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTCGCCATCTACGTCGAGC 139965
Query 96922 CTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGG 96981
| ||||| ||||| || ||||| || | || || | || ||| ||| || || |
Sbjct 139964 CATGGCATGCGGATGTCTTTGAGTTCCTGGACCTGAGAAAGAACCACGGCAAGGAGGAAG 139905
Query 96982 CACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCA 97041
|| ||| | |||||||| || || || ||| | || ||| | ||||||||||| ||
Sbjct 139904 TCCGTGCCCGTGACTTGTTCTACGCTCTATGGATCCCGGATCTCTTCATGAAGCGTGTTG 139845
Query 97042 ACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCT 97101
| | ||| |||||| || ||||||||| || | || || || | || ||
Sbjct 139844 AGAAGAACGGCGACTGGACGCTCATGTGCCCCAACGAATGCCCTGGATTGGCAGACGTCT 139785
Query 97102 GGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGG-CCGATACGTGAGA 97160
||||| ||||| ||||| ||| || ||||||| | ||||| | || |||
Sbjct 139784 ACGGCGATGAGTTCGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGGTCGCAAGA 139725
Query 97161 CGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAAC 97219
| | || | |||| |||| || ||| | |||| | | ||||| ||||| ||||
Sbjct 139724 CCA-TCAAGGCAC-AGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACGGGAAA 139667
Query 97220 TCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCAC 97279
|| | ||| | ||||||||| | || ||||| |||||||| || | || ||
Sbjct 139666 CCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTAC 139607
Query 97280 CATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGC 97339
|||| ||||||| ||||||||||| || || |||||| | | || || ||| |||
Sbjct 139606 CATCCGCAGCTCCAACCTGTGCACGGAGATCGTCGAGTACTCTGCCCCAGATGAGGTGGC 139547
Query 97340 AGTTTGCGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381
|| || ||||||| | |||||| | || ||| ||
Sbjct 139546 CGTGTGTAACTTGGCATCCCTTGCTCTGCCGACGTATGTCGA 139505
>seq71
Length=163616
Score = 91.5 bits (100), Expect = 2e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 70064 GAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTA 70123
|| || || || || || || |||||||||||||||||||||| ||| ||||||| |||
Sbjct 80511 GAAGGTGACCTCGGCCCTGTCTACGGATTCCAGTGGAGGCACTTCGGCGCCAAGTACGTA 80570
Query 70124 GACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCA 70161
||| | |||| ||||| |||| ||||| ||||||||
Sbjct 80571 GACGCCCAGACGGACTACACGGGGCAGGGCGTTGATCA 80608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741055411334840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |