Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq23 98.7 8e-16 >seq23 Length=328845 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || ||||| || ||| |||||| ||||||||||| || | || || | |||||| Sbjct 85314 ACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 85373 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 ||||||||||| | | || | |||||||| ||| || | || |||||||| | Sbjct 85374 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGA 85433 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 || ||| ||||| | |||||||||| || ||| ||| | || || || || Sbjct 85434 ATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTT 85493 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || ||||| || |||||||||||||| Sbjct 85494 CCCGTAAGAGTCTTTACAAAAATCTGCAT 85522 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCG-CTCGTCCT 48575 ||| || ||||| ||||||||||| || |||||||| || || | ||| | | |||| Sbjct 84857 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGCGTCCTCCCATCCT 84915 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 |||||||||| || | | || | |||||||| || || | || ||||| ||| Sbjct 84916 CCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGTGGGATACCCTCCTTATCCT 84975 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 ||| || ||||| | ||||| || | |||||| ||||| || ||||| | Sbjct 84976 GAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCT 85035 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | || || || || || || ||||||||||| Sbjct 85036 TTCCAGTCAGGGTCTTGACGAAAATCTGCAT 85066 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTC 48576 || || ||||| || |||||| ||||||||||| || | | | || || ||||||| Sbjct 85542 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTG-CGACCGTCCTC 85600 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| || || |||| | |||||||| ||| || | | ||||||||| Sbjct 85601 AAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTG 85660 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || ||| ||| | | | ||||| |||| ||||| ||| | || ||||| || Sbjct 85661 GATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTT 85720 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| || || || || |||||||| Sbjct 85721 GCCAGTGAGGGTCTTGACGAAGATCTGCAT 85750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421249100194409