Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq23 98.7 8e-16
seq22 95.1 1e-14
>seq23
Length=328845
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || || |||||||| || ||||||||||||| | || |||||
Sbjct 85539 AGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCC 85598
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | || |||||||| |||| || ||||| |||||| ||| | |||||| |||||
Sbjct 85599 TCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 85658
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | | |||||| | | | | |||||| | ||| |||| ||||||||
Sbjct 85659 TGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTC 85718
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || || || || ||||| || ||||||||
Sbjct 85719 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 85750
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| |||||| ||||||||||| || ||||||||||| | || ||| | | |||
Sbjct 85311 AGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCC 85370
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|||| || || || ||| | || || ||||| |||||| ||| | ||||| |||||
Sbjct 85371 TCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCT 85430
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
||| | | ||| || | | | || ||| | ||| || | || || ||
Sbjct 85431 TGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTC 85490
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| || || || || ||||||||||||||
Sbjct 85491 TTTCCCGTAAGAGTCTTTACAAAAATCTGCAT 85522
>seq22
Length=330427
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || ||||| |||| || || ||||||||||| || ||||||||||| |
Sbjct 150833 CCTCCACGGAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 150774
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | ||||||| | || ||||| || | || || ||||| |||||| ||
Sbjct 150773 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 150714
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||||| ||||| || | ||| || | | | | ||||||| | ||||
Sbjct 150713 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACC 150654
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | |||||| || || || ||||| || || || || || |||||
Sbjct 150653 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 150607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405085980762910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |