Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq18 125 9e-24 >seq18 Length=361580 Score = 125 bits (138), Expect = 9e-24 Identities = 365/559 (65%), Gaps = 10/559 (2%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || ||||| || ||| ||||||||||| | || | |||||||| || || || Sbjct 110982 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGG 111041 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || | ||| ||||||||||| || ||||| || ||||| || || || || || ||||| Sbjct 111042 CCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAG 111101 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 32837 || || || || || || ||||||| || | || | || || | | || || Sbjct 111102 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAATCCTTATCTTGG 111161 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 |||||| | ||||| ||||||||||| || | ||||| || ||||| || ||||| Sbjct 111162 ATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 111221 Query 32898 AAGAGATAGtttttttCA--TTACTATCTTTAACATATGTATCAATCAAAAGACTATACA 32955 ||||| || | || | || | || || | ||||| ||||| | || || Sbjct 111222 AAGAGGTATGTGCGTTGAGCTTGC--TCCTTGATGTATGTGTCAATGAGGAGGGAGTATG 111279 Query 32956 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAA 33015 | || | |||||||| || || ||||| || ||||||||||| | || || | | Sbjct 111280 TCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 111339 Query 33016 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 33075 |||| || || | | || || || | || || || || ||||||||| || | Sbjct 111340 TCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGG 111399 Query 33076 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCC 33132 | || || || | || || || || || ||||| | | | || |||| Sbjct 111400 CGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCGTCGTCATTGAGGCGGTTGTTCC 111459 Query 33133 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192 | || | | || || || | ||| | || || ||||||| || || || || |||| Sbjct 111460 AGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGACGCTTCCGCCT 111519 Query 33193 TTTTATACATATTCCAGAT 33211 | || ||||| | |||||| Sbjct 111520 TCTTGTACATCTGCCAGAT 111538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633628760556400