Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq18 116 4e-21 >seq18 Length=361580 Score = 116 bits (128), Expect = 4e-21 Identities = 367/567 (65%), Gaps = 9/567 (2%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || ||||| || || | ||| ||||| || || || | ||| ||| ||| || | Sbjct 110981 GCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAG 111040 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || | | || || || ||||||||||| || || || || || ||| || || || Sbjct 111041 GCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAACCGGAGAAGAA 111100 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAA---TTACT 93267 ||||| || ||||| || || || || | ||| | || ||| | |||| ||| Sbjct 111101 GATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAA---GTGGAATCCTTATC 111157 Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 |||||| | | ||||| ||||| || ||||| || ||||| | || ||||| || Sbjct 111158 TTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGC 111217 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || || ||||| || | | || |||||||| || || | || || || Sbjct 111218 ATTGAAGAGGTATGTGCGTTGAGCTTGCTCCTTGATGTATGTGTCAATGAGGAGGGAGTA 111277 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | || | || | ||||| || |||||||| |||||||| || | ||||| | Sbjct 111278 TGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGG 111337 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 |||||| || || || | ||| | ||| || || ||||| || || || || || Sbjct 111338 GATCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGC 111397 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATC 93564 || || ||||| | | || || || | ||| || || || | | || | Sbjct 111398 GGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCGTCGTCATTGAGGCGGTTGTT 111457 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||| ||| || || || || ||||| | || || | ||||| || || ||||| || Sbjct 111458 CCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGACGCTTCCGC 111517 Query 93625 TTTTTTGTACATATCCCATATGTCTTG 93651 || |||||||| | ||| || | ||| Sbjct 111518 CTTCTTGTACATCTGCCAGATCTATTG 111544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556857953049160