Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq83 87.8 4e-12 >seq83 Length=147365 Score = 87.8 bits (96), Expect = 4e-12 Identities = 130/179 (73%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 280184 CAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCCACTGA 280243 ||| ||||| || ||||| || || ||||| ||||||||||||||| ||| ||| | Sbjct 58539 CAACGGTGCCGGAAAGTCAACTCTCATCAAGCTCCTGACTGGCGAGA-CCATCCCAACCA 58597 Query 280244 GGGGTCCGT-TTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTC 280301 || |||| ||| |||||| |||||| |||| || | |||| | |||||||| | Sbjct 58598 CTGG-CCGTGTTGAGAAGCACCCCAACTTGCGTATTGGTTACATTAAGCAGCACGCCCTG 58656 Query 280302 CACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTATGC 280360 | ||| | |||| || || || | ||| || ||||| ||| | |||||||| || || Sbjct 58657 GAGCACGTGGAGATGCATCTCGAGAAGACCCCCAACCAGTACCTCCAGTGGCGTTACGC 58715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027831413813969