Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq23 176 8e-39 seq28 120 6e-22 seq18 105 1e-17 seq83 89.7 9e-13 seq6 89.7 9e-13 >seq23 Length=328845 Score = 176 bits (194), Expect = 8e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || | |||||||| || || ||||| || || ||||| || |||||| Sbjct 85524 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 85583 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || || | || ||||| || ||| Sbjct 85584 AGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 85643 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||| || ||||||||||| | || || || Sbjct 85644 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACC 85703 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || || ||||||||||||||||| |||||||| Sbjct 85704 TCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 85750 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | |||||||| ||||| || |||||||| ||||| || Sbjct 85068 CCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGAC 85127 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| ||||| Sbjct 85128 AGGGTGCGACCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 85187 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| ||||| ||||| | ||||||| |||||||| || | || || ||| Sbjct 85188 ATGCCCTCCTTATCTTGGATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACT 85247 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || ||||| ||||||||||||||||| || ||||| Sbjct 85248 TCCAGCGTAATTGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 85294 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || ||| ||| || |||||||| || ||| Sbjct 84840 CCGCCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 84899 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || ||||||||||| || | |||||| || || || || || | || ||||| ||||| Sbjct 84900 AGCGTCCTCCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGTGGG 84959 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || |||||||| | ||||||| || |||||||| | || || || Sbjct 84960 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACC 85019 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || ||||| ||||| || |||||||||||||| |||||||| Sbjct 85020 TCGAGAGTAATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 85066 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | ||||| || || |||||||| || || ||||| || || || Sbjct 85296 CCACCACGAAGACGGAGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAC 85355 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || ||||| || ||| Sbjct 85356 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 85415 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| | ||||||| || ||||| || | |||||| || Sbjct 85416 ATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACC 85475 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || || |||||||| || ||||| || || |||||||| Sbjct 85476 TCAAGCGTAATCGTCTTTCCCGTAAGAGTCTTTACAAAAATCTGCAT 85522 Score = 123 bits (136), Expect = 5e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || || ||||| || |||||||| || |||||| Sbjct 85752 CCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 85811 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| |||||||| || || | ||| ||||| || || Sbjct 85812 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGG 85871 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| ||| ||| |||||||| || | || || || Sbjct 85872 ATTCCCTCCTTGTCTTGGATCTTGCTCTTAACGTTGTCGATGGTATCGGACGACTCGACC 85931 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | ||||||||| || || || Sbjct 85932 TCAAGGGTGATGGTCTTGCCAGT 85954 >seq28 Length=287958 Score = 120 bits (132), Expect = 6e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||||| || || | ||||| || | |||||| || || || || Sbjct 243635 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 243694 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || ||||| || ||||||||||| ||||| | |||||| ||| Sbjct 243695 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 243754 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | || || || || | ||||||||| || ||||| | |||||||||||| Sbjct 243755 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 243813 >seq18 Length=361580 Score = 105 bits (116), Expect = 1e-17 Identities = 315/474 (66%), Gaps = 18/474 (4%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || | ||| ||||| || | || || |||||||||||||| ||| || | Sbjct 110678 CATGACACCAGTCTTTTGGTAGTCGGCAACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGC 110737 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAA--ACTGCTTGGGGTAA 10052 ||||| ||| ||||||||||||||| ||||| | |||| | | ||| || | Sbjct 110738 CAGGGAGATGTTCTCCATGAAGTCAAATGGGTTG--GTCGCCTTGTAGTACTTCTCGTTA 110795 Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112 ||||| | | | | ||| || |||||||| ||||| || |||||| || | | Sbjct 110796 CCGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCG 110855 Query 10113 TTCATGCCAATCATGCGG-CAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171 |||||||| | || ||| ||||| | || || | ||| |||| ||| || ||| Sbjct 110856 TTCATGCCGAGCA-GCGCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGCTGAC 110914 Query 10172 CGCTTCCTCGACGATGCTCTTT-ACCACGT-----CAAGGGACAGCTTGTTCTCGAGCTT 10225 || || | || | |||| || | | | ||| | | ||| || ||| | Sbjct 110915 AGCCTCGGTAATGACG-TCTTGGACGGCCTTCTTACTTGGG-CGG--TGT-CT-GAGATG 110968 Query 10226 CGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTT 10285 || | ||||| | || | |||||| |||||||| ||| ||||| |||||| Sbjct 110969 GGAGAAGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTT 111028 Query 10286 GGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGA 10345 ||| || ||| || | |||||| || || || ||||||||||||| | ||| || Sbjct 111029 GGAGAAGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGA 111088 Query 10346 CCCGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAA 10399 |||||||| | | |||||| ||| | |||| ||||| |||| ||||| Sbjct 111089 ACCGGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAA 111142 >seq83 Length=147365 Score = 89.7 bits (98), Expect = 9e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 225436 GCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAG 225495 ||| ||| |||| |||||||| |||||||| || || || | || | | | || | Sbjct 58251 GCAGACTTCGTCGAGGAAGCCGGAGTCGTGAGAAACGATCAGAGAAGTGATCTCGGTGTG 58192 Query 225496 GCCCTTGAGGTG--CGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGT 225553 | |||||||| | || |||||| |||||| || |||| ||| || |||||| Sbjct 58191 GGTCTTGAGGTAATCCTG--GAGCCACTTGACGTTGGCAACATCCAAGTGATTGGTAGGT 58134 Query 225554 TCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATT 225613 ||||||| ||| || | || || | || | ||||| | | |||| |||||||| Sbjct 58133 TCGTCCAAAAGGAGAACATCGGCCTTCATCAACATGGCTCTGGCAAGAGCGAGCTTCATC 58074 Query 225614 TTCCAGCCCCCGGACAGGGAGCCGA 225638 ||||| || |||||||| ||||||| Sbjct 58073 TTCCATCCACCGGACAGCGAGCCGA 58049 Score = 86.0 bits (94), Expect = 1e-11 Identities = 145/208 (70%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 224974 GGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTG 225033 ||| || |||||||||| |||||||||||||||| | || || || |||| | || | Sbjct 58716 GGCGTAACGCCACTGGAGGTACTGGTTGGGGGTCTTCTCGAGATGCATCTCCACGTGCTC 58657 Query 225034 GAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCG 225093 | || ||||| | ||| | || |||| |||||| |||||| ||| ||| Sbjct 58656 CAGGGCGTGCTGCTTAATGTAACCAATACGCAAGTTGGGGTGCTTCTCAACACGGCC--- 58600 Query 225094 AGTCGGTTG----TGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCAT 225149 ||| ||||| | |||||| || |||| ||||||||| || | ||| || ||||| | Sbjct 58599 AGT-GGTTGGGATGGTCTCGCCAGTCAGGAGCTTGATGAGAGTTGACTTTCCGGCACCGT 58541 Query 225150 TGGGGCCAATCACGCCAATCCGGGATGA 225177 || || || | | || | ||||| || Sbjct 58540 TGCCACCGATGATGGCAGTGCGGGAGGA 58513 >seq6 Length=474936 Score = 89.7 bits (98), Expect = 9e-13 Identities = 239/357 (67%), Gaps = 14/357 (4%) Strand=Plus/Plus Query 173099 AAAATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGGACAACTCGTTCGGTAAC 173158 || || ||||| || | ||||| || |||||| | || || ||| ||||| ||| Sbjct 183495 AACATCGACACCATCTTCCACTTCGCCGCGCAGTCGCACGTCGACCTGAGCTTCGGAAAC 183554 Query 173159 TCGCT--GGCATTTACCATGAACAACGTCTACGGGACCCACGTTCTCCTGGAATGCGCGA 173216 || || ||| || ||| | |||||||||||| |||||||| || || || | ||| | Sbjct 183555 TC-CTACGGC-TTCACCCACACCAACGTCTACGGCACCCACGTCCTGCTCGAGTCCGCCA 183612 Query 173217 GGCTCTATGGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGACGAAGTATACGGCGAGA 173276 | | | ||| || |||| |||||| | | || ||||| || || ||||| ||| Sbjct 183613 AG---AAGGTCGGCATCAAGCGCTTCATCCACATCTCCACCGATGAGGTCTACGGTGAG- 183668 Query 173277 GCAGTC-TGGGCAAAAAAGAAGGCCTCGATGAACACTCG-TCCCTCGAGCCAACAAACCC 173334 ||| || | | | || | |||| | | ||| | ||||| ||||| ||||| Sbjct 183669 ---GTCGAGGACGAGGATGATGACCTC-CTCGAGACTAGCATCCTCGCCCCAACCAACCC 183724 Query 173335 ATATGCAGCAGCCAAGGCTGGTGCCGAAATGATGGCACGTGCATATCACACATCGTACAA 173394 || || || ||||||| | || || ||| ||| | | || || | | ||| Sbjct 183725 CTACGCCGCCTCCAAGGCCGCCGCTGAGATGTTGGTCCACTCTTACCAGAAGAGCTTCAA 183784 Query 173395 GCTACCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCCCGCATCAGTTCCCCGA 173451 ||| || |||||| | ||| ||||||| || || ||||| || ||||||||||| Sbjct 183785 GCTCCCCGTCATCATCGTCCGCAGCAACAACGTCTACGGCCCCCACCAGTTCCCCGA 183841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921617688205480