Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq23 114 1e-20
seq22 111 2e-19
>seq23
Length=328845
Score = 114 bits (126), Expect = 1e-20
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||||||||| ||| |||||| ||||| ||||| || | ||| || || | || ||
Sbjct 85314 ACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 85373
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||||||||| || || || ||||||||||| | || | | |||||||| | ||
Sbjct 85374 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGT-CTTG 85432
Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
| | || | |||| | | | || ||| |||||||| || | ||| || || ||
Sbjct 85433 AATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTT 85492
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || ||||||||||| || |||||
Sbjct 85493 TCCCGTAAGAGTCTTTACAAAAATCTGCAT 85522
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| ||||| ||||| || | ||||| || |||| || |||||||| || |||||
Sbjct 85559 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAA 85618
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || ||||||||||| | || | || |||||||||| ||| || || | |
Sbjct 85619 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATT 85678
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | |||||| ||| || || || | |||||||| ||||| || || ||||| ||
Sbjct 85679 GTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 85738
Query 42197 AAAGATTTGCAT 42208
||||| |||||
Sbjct 85739 GAAGATCTGCAT 85750
Score = 100 bits (110), Expect = 3e-16
Identities = 156/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| || | ||||||||||| || || ||||| || ||| |||| | |
Sbjct 84851 ACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCC 84910
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || |||||||| ||||| || || || ||||||||||| | ||| | | ||||||
Sbjct 84911 ATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGTGGGATACCCTCCTT 84970
Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 42170
||| ||| | || | |||| ||| | | | ||||| || || || |||| ||
Sbjct 84971 ATCC-TGAATCTTGGACTTGA-CGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTA 85028
Query 42171 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || || || || ||||| || || || |||||
Sbjct 85029 ATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 85066
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || |||||||||| ||| || || | || || |||||||| || |||||
Sbjct 85103 CTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCCTCGAGCTGCTTGCCCGCGAA 85162
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || ||||||||||| | ||| | || |||||| || ||| || |||| |
Sbjct 85163 AATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTTGGACTTGACGTT 85222
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | || || ||| || || || | ||| || || || || || || ||||| ||
Sbjct 85223 ATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGGTGAGGGTCTTGAC 85282
Query 42197 AAAGATTTGCAT 42208
|||||||||||
Sbjct 85283 GAAGATTTGCAT 85294
>seq22
Length=330427
Score = 111 bits (122), Expect = 2e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| || | ||| |||||| || || ||||| || | || || || |||| ||
Sbjct 150815 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 150756
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| || ||||| || || ||||||||||| | || | | |||||||||| |
Sbjct 150755 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 150696
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179
|| || |||| | | | |||||| ||| ||||| || | ||||| || |||
Sbjct 150695 ATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTG 150636
Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || ||||| || |||||||||||
Sbjct 150635 CCCGTCAGGGTCTTCACGAAGATTTGCAT 150607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543210022824560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |