Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq23 114 1e-20
seq22 105 7e-18
seq28 98.7 1e-15
>seq23
Length=328845
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | | ||| || | |||| ||||| || || ||||||||||| || |
Sbjct 85523 ACCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGA 85582
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||||| |||| |||||||||||||| || |||| || ||||||||||| |||||
Sbjct 85583 GAGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGG 85642
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || ||| ||| || | || || | || ||
Sbjct 85643 AATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAAC 85702
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | ||| | ||||||||| || | || || ||||| || |||||
Sbjct 85703 CTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 85750
Score = 102 bits (112), Expect = 8e-17
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | ||| || || || || ||||||||||| | | |||||| | ||
Sbjct 85083 AGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCC 85142
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| || |||| || ||||||||||| || || || || || || |||
Sbjct 85143 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 85202
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGG 64409
|| || || ||| || || | |||| ||| || || ||||| | || | |
Sbjct 85203 TGGATCTTGGACTTGACGTTATCGATGGTAT--CCGACGACTCGACTTCCAGCGTAATTG 85260
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| ||||| | || || ||||| ||||||||
Sbjct 85261 TCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 85294
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || ||||||||||| || | | |||||| | || || |||||||| ||
Sbjct 85326 GTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCCAGCTGCTTACCA 85385
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || || ||||||||||| |||||||| || || || ||||| || || |||
Sbjct 85386 GCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGAATCTTCGACTTG 85445
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | ||||| | ||||| || | || | ||||| || || | |||
Sbjct 85446 ACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTTCCCGTAAGAGTC 85505
Query 64427 TTTACGAAAATTTGCAT 64443
||||| ||||| |||||
Sbjct 85506 TTTACAAAAATCTGCAT 85522
Score = 87.8 bits (96), Expect = 2e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| || || || |||||||| || | || |||||| |||| ||||| |||||||||
Sbjct 85782 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCG 85841
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359
|| | || || || |||||||| || || ||||| || || ||||| || ||
Sbjct 85842 GCGAAGATCAGACGTTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGGATCTT 85894
>seq22
Length=330427
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| || || | |||| || || || || || |||||||| || |
Sbjct 150834 ACCTCCACGGAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 150775
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| |||| || |||||||||||||| | || || ||||||||||| || ||
Sbjct 150774 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 150715
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|||||| || || || || || || ||| ||| || | || || | |||||
Sbjct 150714 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCAC 150655
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||| |||| || || ||||| ||||||||
Sbjct 150654 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 150607
>seq28
Length=287958
Score = 98.7 bits (108), Expect = 1e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315
|| || |||||||| || | | ||||| | || || ||||||||||| ||| | ||
Sbjct 243635 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 243694
Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375
|| ||||||||||| ||||||||||| || || ||||| || || ||| ||| ||
Sbjct 243695 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 243754
Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434
| ||||| || || || || | || | ||||||||| ||||| || || |||||
Sbjct 243755 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 243813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499642245565960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |