Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq23 129 6e-25 seq18 98.7 1e-15 seq22 95.1 1e-14 seq46 86.0 6e-12 >seq23 Length=328845 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| ||||| | | | |||||||| |||||||||||||| | Sbjct 85296 CCACCACGAAGACGGAGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAC 85355 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || ||||| | | |||| || ||||| ||||||||||| Sbjct 85356 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 85415 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| | || | || | | || | ||| |||| || ||||| Sbjct 85416 ATACCCTCCTTGTC-TTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCAC 85474 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | ||| | ||| || || || ||||| ||||||||||||||||| Sbjct 85475 CTCAAGCGTAATCGTCTTTCCCGTAAGAGTCTTTACAAAAATCTGCAT 85522 Score = 102 bits (112), Expect = 8e-17 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| || | | ||||| || || || || | | | Sbjct 84875 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCCAGCTGCTTGCCAGCAAA 84934 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| || ||||| ||||| || || ||||| || || || ||| | || | || | | Sbjct 84935 GATCAGGCGCTGCTGGTCTGGTGGGATACCCTCCTTATC-CTGAATCTTGGACTTGACGT 84993 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | |||||| | ||||| ||||||| || | || || |||||||| || || Sbjct 84994 TG-TCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAGGGTCTTG 85052 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 85053 ACGAAAATCTGCAT 85066 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||||||| | ||| || |||||| || || || || | Sbjct 85557 GACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCG 85616 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || || ||||| ||||||||||| || || || ||||| ||| || || | | Sbjct 85617 AAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACA 85676 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||||| |||||| ||||| | || | || || ||||| || || || Sbjct 85677 TTG-TCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTT 85735 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 85736 GACGAAGATCTGCAT 85750 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || || || | | | |||||||| || |||||||||||| Sbjct 85752 CCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 85811 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||| ||||| || |||| |||| ||||| || |||||||| || Sbjct 85812 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGG 85871 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| || | || | |||| ||| || | ||| |||| |||||| | Sbjct 85872 ATTCCCTCCTTGTC-TTGGATCTTGCTCTTAACGTTG-TCGATGGTATCGGACGACTCGA 85929 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCA 138592 |||| | || | || || ||||||| Sbjct 85930 CCTCAAGGGTGATGGTCTTGCCAGTCA 85956 >seq18 Length=361580 Score = 98.7 bits (108), Expect = 1e-15 Identities = 486/760 (64%), Gaps = 19/760 (3%) Strand=Plus/Minus Query 52086 AACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGC 52145 || || ||||||||||| || ||| ||||| | || ||||||||||| | || | Sbjct 111445 AATGACGACGAGCGCTACTTCATCTCCCACGTTCTCGCTTTCTTCGCCGCGTCTGACGGA 111386 Query 52146 ATCGTGAACATTAACCTCATCGAGTACATGCAGCGGAACGTTCCGGAACTC-GAGGCGCA 52204 || || ||| |||||| ||||| | | |||| | | ||| || | | || || | Sbjct 111385 ATTGTCAACGAGAACCTCCTCGAGCGCTT-CAGCAGCGAGGTCCAGATCCCAGAAGCCCG 111327 Query 52205 ATACTTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCT 52264 | ||| || ||| ||| | | |||||| | | ||| | |||| ||| || || Sbjct 111326 CTGCTTCTACGGTTTCCAAATCATGATCGAGAACATTCACGCCGAGACATACTCCCTCCT 111267 Query 52265 CATTGAGCAGCTG-ATAAAAGATGA-GCACGAGCGCG-ACACGCTGCTGAATGCGTTCGA 52321 |||||| || | || || || | || | | ||| | || || | ||||| |||| Sbjct 111266 CATTGA-CACATACATCAAGGAGCAAGCTCAA-CGCACATAC-CTCTTCAATGCCATCGA 111210 Query 52322 GCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACAC 52381 | | | || ||| | || ||||| | |||||| | | ||||||| | || | Sbjct 111209 GACCATTCCTTGCATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAA---GATAA 111153 Query 52382 CG---CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttC 52438 | |||| | || |||| | || |||||||| || ||||| | || || || Sbjct 111152 GGATTCCACTTTCGCTCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTC 111093 Query 52439 CGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTT 52498 ||| ||| ||| |||| || | | || | | ||| | ||| | |||||||| || Sbjct 111092 CGGTTCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTT 111033 Query 52499 CAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTA 52558 | ||||||| | || || || ||||| || || ||||| ||||| || |||||| || Sbjct 111032 CTCCAACGAGCTCATCTCCCGTGACGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTT 110973 Query 52559 CAAGACGCGC-GTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGG 52617 | | | | |||| || | | | | ||| | | | | |||| Sbjct 110972 CTCCCATCTCAGACACCGCCCAAGTAA----GAAGGCCGTCCAAGACGTCATTACCGAGG 110917 Query 52618 CGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGA 52677 | || ||||| ||||||| || || | || || || | |||||| ||||||| Sbjct 110916 CTGTCAGCATCGAGCAGGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGGCATGA 110857 Query 52678 ACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCG 52737 |||| | | ||| | ||||| ||||| || || || | ||| || | |||| Sbjct 110856 ACGCCAACTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCCCTCG 110797 Query 52738 GGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTG 52797 | | ||||||| ||| || ||| || ||||| || ||| | ||||| || || | Sbjct 110796 GTAACGAGAAGTACTACAAGGCGACCAACCCATTTGACTTCATGGAGAACATCTCCCTGG 110737 Query 52798 AGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || ||||||||||| ||||||||||| || | ||| || Sbjct 110736 CAGGAAAGACCAACTTCTTCGAGAAGCGCGTTGCCGACTA 110697 >seq22 Length=330427 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||||||||| || || |||| Sbjct 150800 GACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCG 150741 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| |||||||| || || || || ||||| ||| || || | | Sbjct 150740 AAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACA 150681 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||||| |||||||||||| | || | || || || ||||| || || Sbjct 150680 TTG-TCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTT 150622 Query 138600 TACAAAAATCTGCATGGCT 138618 || || || |||||| || Sbjct 150621 CACGAAGATTTGCATGACT 150603 >seq46 Length=214393 Score = 86.0 bits (94), Expect = 6e-12 Identities = 227/347 (65%), Gaps = 15/347 (4%) Strand=Plus/Plus Query 153813 CCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGG 153872 ||||| ||||||| | |||||| || ||| ||||| ||||||||| ||| || | Sbjct 139739 CCCTCCTTCTCGTAGCCCTCGTAGAGCGCCTCGAACTCATCGCCGTAGACGTCTGCCAAT 139798 Query 153873 CCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTG------ACGCGT 153926 || || || | | || ||||| |||| ||| |||| |||| || || Sbjct 139799 CCAGGGCATTCGTTGGGGCACATGAGCGTCCA------GTCGCCGTTCTTCTCAACACGC 139852 Query 153927 CGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCC 153986 |||||| |||||||| | ||| || ||||| | | ||| || || | |||||| Sbjct 139853 TTCATGAAGAGATCCGGGATCCATAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCC 139912 Query 153987 GCGCCCATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATG 154046 ||| ||| | |||| | || | | ||| || || ||||| || || | | Sbjct 139913 TTGCCGTGGTTCTTTCTCAGGTCCAGGAACTCAAAGACATCCGCATGCCATGGCTCGACG 139972 Query 154047 TAGACGGCCAGGGCACCTTTACGCTTT---CCGCCCTGATCGACGTGGCGCACCATATTG 154103 |||| ||| | |||||| ||||| || ||||| ||||||| | | | ||| Sbjct 139973 TAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTATCTTGCAGTGTTG 140032 Query 154104 TTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGT 154150 ||||||||||| | |||||| | | ||| | | | | |||||||| Sbjct 140033 TTGAAGACGCGGAGCATGGGGACGATACCGTTCGAGTTTCCGTTGGT 140079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259862858480