Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq23 107 2e-18
seq22 89.7 5e-13
>seq23
Length=328845
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | || | ||||| ||||||||| || || || |||||||| |
Sbjct 85068 CCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGAC 85127
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| || ||||| || || ||| | |||| |||||||| || || ||
Sbjct 85128 AGGGTGCGACCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 85187
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||| || ||| || ||||| | |||| ||| |||| |||||||
Sbjct 85188 ATGCCCTCCTTATCTTGGATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACT 85247
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || || ||||| || || || || || || |||||
Sbjct 85248 TCCAGCGTAATTGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 85294
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | |||||||| | || ||||| || ||||| ||||| || |
Sbjct 85296 CCACCACGAAGACGGAGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAC 85355
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || ||||| |||||| |||||||| || |||||
Sbjct 85356 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 85415
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| ||||||||||| || ||| ||||| | || | ||| || | || ||
Sbjct 85416 ATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACC 85475
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | ||| || || || ||||| |||||||||||||||||
Sbjct 85476 TCAAGCGTAATCGTCTTTCCCGTAAGAGTCTTTACAAAAATCTGCAT 85522
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | ||||| || | || ||||| || ||||| ||||| |||
Sbjct 85524 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 85583
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| || || ||| | |||| |||||||| || |||||
Sbjct 85584 AGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 85643
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||||||| ||| ||| ||| | | |||| |||||| | ||| ||
Sbjct 85644 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACC 85703
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || ||||| || || || || || || ||||||||
Sbjct 85704 TCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 85750
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
|||||| || | || ||| || || || ||||| |||| || ||| | ||| ||
Sbjct 84857 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTC 84916
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
||||| || ||||| |||||| |||||||| || || || || |||||||| |||
Sbjct 84917 CAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGTGGGATACCCTCCTTATCCTG 84976
Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
|| || ||||| ||||| | | |||||||| | ||| || |||| || | || |
Sbjct 84977 AATCTTGGACTTGACGTTGT-CAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCT 85035
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| || ||||| || || || |||||||||||
Sbjct 85036 TTCCAGTCAGGGTCTTGACGAAAATCTGCAT 85066
>seq22
Length=330427
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/234 (68%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| || || || | || || ||||| || | || ||||| || || || ||||| ||
Sbjct 150836 GCACCTCCACGGAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCC 150777
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| ||||| || || ||||| || || ||| |||||| |||||||| || ||
Sbjct 150776 GAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGG 150717
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| || |||||||||||| ||| || ||||| | |||| ||||| | |||
Sbjct 150716 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCC 150657
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117
|| || | ||| | || ||||| ||||| || || || || || |||||| ||
Sbjct 150656 ACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACT 150603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475498369002160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |