Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq23 107 2e-18
>seq23
Length=328845
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || ||||| ||||| || ||||| ||||| || |||||
Sbjct 85065 ATACCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCA 85124
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| || | || || || ||| | |||| || |||||||||||
Sbjct 85125 GACAGGGTGCGACCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGT 85184
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| ||||| || |||||||| || || |||| || | || | ||| || || |||||
Sbjct 85185 GGGATGCCCTCCTTATCTTGGATCTTGGACTTGA-CGTTATCGATGGTATCCGACGACTC 85243
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||| || |||| || || ||||| || || || || || ||||||||
Sbjct 85244 GACTTCCAGCGTAATTGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 85294
Score = 93.3 bits (102), Expect = 4e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196
|||||| || || ||||| || || || || || | ||| ||| |||| ||
Sbjct 85319 ATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCCAGCTG 85378
Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256
|| || || | |||| || ||||||||||| ||||| || || || |||||||| ||
Sbjct 85379 CTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGAATCTT 85438
Query 45257 TTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315
|||| || | || | ||| ||||| || || || || || |||| ||| || || |
Sbjct 85439 CGACTTGA-CGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTTCCCG 85497
Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| ||||||||||| |||||
Sbjct 85498 TAAGAGTCTTTACAAAAATCTGCAT 85522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452000889133640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |