Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq23 107 2e-18 >seq23 Length=328845 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| ||||| || ||||| ||||| || ||||| Sbjct 85065 ATACCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCA 85124 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| || | || || || ||| | |||| || ||||||||||| Sbjct 85125 GACAGGGTGCGACCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGT 85184 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || |||||||| || || |||| || | || | ||| || || ||||| Sbjct 85185 GGGATGCCCTCCTTATCTTGGATCTTGGACTTGA-CGTTATCGATGGTATCCGACGACTC 85243 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || |||| || || ||||| || || || || || |||||||| Sbjct 85244 GACTTCCAGCGTAATTGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 85294 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 |||||| || || ||||| || || || || || | ||| ||| |||| || Sbjct 85319 ATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCCAGCTG 85378 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 || || || | |||| || ||||||||||| ||||| || || || |||||||| || Sbjct 85379 CTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGAATCTT 85438 Query 45257 TTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 |||| || | || | ||| ||||| || || || || || |||| ||| || || | Sbjct 85439 CGACTTGA-CGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTTCCCG 85497 Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| ||||||||||| ||||| Sbjct 85498 TAAGAGTCTTTACAAAAATCTGCAT 85522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452000889133640