Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq23 132 1e-25 seq22 132 1e-25 seq28 87.8 4e-12 >seq23 Length=328845 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | || || || |||||||| || | ||||||||| | || || Sbjct 85302 CGAAGACGGAGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTG 85361 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| ||||||||||| || || ||||| || ||||||||||||||| ||| || Sbjct 85362 CGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCC 85421 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||| ||| || | ||| || | || ||| || || | | Sbjct 85422 TCCTTGTCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGC 85481 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| ||||| ||||| || |||||||| || Sbjct 85482 GTAATCGTCTTTCCCGTAAGAGTCTTTACAAAAATCTG 85519 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | ||| |||||||||||||| || | ||||||||| | | ||| Sbjct 85530 CGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTG 85589 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || ||||| || || ||||||||||||||| ||| || Sbjct 85590 CGACCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCC 85649 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| |||||| |||| |||||| | | || || ||||| Sbjct 85650 TCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAA 85709 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || || || || || Sbjct 85710 GTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTG 85747 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || || |||||||| |||| |||||| |||| || || | ||||| Sbjct 85083 AGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCC 85142 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||| || || |||||||||||||| || || || || Sbjct 85143 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 85202 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||| || | | || || |||| ||| || ||| Sbjct 85203 TGGATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTC 85262 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || ||||| Sbjct 85263 TTTCCGGTGAGGGTCTTGACGAAGATTTG 85291 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| |||||| |||| ||||||||| || ||| Sbjct 84846 CGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTC 84905 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || ||||| ||||||||||| || || ||||| || ||||||||||| || || || Sbjct 84906 CTCCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGTGGGATACCC 84965 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| ||| || | |||||| | | || || || | Sbjct 84966 TCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGA 85025 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || ||||| || Sbjct 85026 GTAATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTG 85063 Score = 100 bits (110), Expect = 7e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | |||||| ||||||||||| |||| ||||||||| | | || | || || Sbjct 85767 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 85826 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| ||||||||||| ||||| ||||||||||| ||||| || || Sbjct 85827 TCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGGATTCCCTCCTTGTCT 85886 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||| || | | || || || | ||||| ||| Sbjct 85887 TGGATCTTGCTCTTAACGTTGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATGGTC 85946 Query 199598 TTACCCGT 199605 || || || Sbjct 85947 TTGCCAGT 85954 >seq22 Length=330427 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||||||||| | ||| || || |||||||| |||| ||||||||| | | || Sbjct 150827 CGGAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 150768 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| ||||||||||| || |||||||||||||| |||||| Sbjct 150767 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCC 150708 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| ||||| | | || || || | Sbjct 150707 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGG 150648 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| || || ||||| || ||||| Sbjct 150647 GTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTG 150610 >seq28 Length=287958 Score = 87.8 bits (96), Expect = 4e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | ||| | |||||| || |||||||| || || |||| Sbjct 243633 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 243692 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | || ||||||||||||||| |||||| || || || ||||| ||| || | Sbjct 243693 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 243752 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || || | | || || || | ||||| ||||| ||||| Sbjct 243753 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 243798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178915422082403