Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq22 152 6e-32 seq23 143 3e-29 seq28 116 4e-21 >seq22 Length=330427 Score = 152 bits (168), Expect = 6e-32 Identities = 149/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||||||||| Sbjct 150798 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 150739 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | | |||||||||| |||||| ||||| | Sbjct 150738 GATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATT 150679 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||| ||||| || | ||||| || ||||||||||| || || || Sbjct 150678 GTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCAC 150619 Query 46582 AAAGATTTGCAT 46593 ||||||||||| Sbjct 150618 GAAGATTTGCAT 150607 >seq23 Length=328845 Score = 143 bits (158), Expect = 3e-29 Identities = 147/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||||| |||||||| |||| || ||||||||||| ||||| Sbjct 85559 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCAAGCTGCTTGCCCGCGAA 85618 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | || |||||||||| ||||||| ||| | | Sbjct 85619 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATT 85678 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||| || || |||| |||||||| ||||| || || || || || Sbjct 85679 GTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 85738 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 85739 GAAGATCTGCAT 85750 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| |||||| ||||| ||||| || || || ||||| | || ||| Sbjct 85086 ACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCCTCG 85145 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| ||||| |||| |||||||||||| | || | || |||||| || | Sbjct 85146 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGG 85205 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||||| | | | || || ||| || || |||| ||| || || || Sbjct 85206 ATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTT 85265 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || ||||||||||| Sbjct 85266 CCGGTGAGGGTCTTGACGAAGATTTGCAT 85294 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||| || |||||| || || |||||||| || || ||||| | || || Sbjct 85314 ACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 85373 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || || || |||| |||||||||||| | || | | ||||||||| Sbjct 85374 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGA 85433 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||||| | | | || ||| |||||||| || | ||| || || || Sbjct 85434 ATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTT 85493 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || ||||| || ||||| Sbjct 85494 CCCGTAAGAGTCTTTACAAAAATCTGCAT 85522 Score = 107 bits (118), Expect = 2e-18 Identities = 128/171 (75%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| || || |||||||||||||| Sbjct 85787 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAA 85846 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| || |||||||| | || | | ||||||||| |||||| |||| | ||| Sbjct 85847 GATCAGACGTTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGGATCTTGCTCTT-AACGT 85905 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571 | | | || ||| ||| || || || | |||||||| ||||| |||| Sbjct 85906 TGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCA 85956 Score = 96.9 bits (106), Expect = 4e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||||| || | || |||||||| ||||| ||||||||| || || | | | Sbjct 84851 ACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCC 84910 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||| || || |||| |||||||||||| | || | | |||||| Sbjct 84911 ATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGTGGGATACCCTCCTT 84970 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 ||| ||||| ||||| ||| | | | ||||| || || || || | || | Sbjct 84971 ATCCTGAATCTTGGACTTGA-CGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAA 85029 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || || ||||| || || || || || ||||| Sbjct 85030 TGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 85066 >seq28 Length=287958 Score = 116 bits (128), Expect = 4e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| |||||||| | || |||||||||||||| || || | Sbjct 243633 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 243692 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | | ||||||||| ||||||| ||||| | Sbjct 243693 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 243752 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | || ||| || || || || | |||||||| |||||||||| || || || | Sbjct 243753 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGA 243812 Query 46584 AG 46585 || Sbjct 243813 AG 243814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565235510218680