Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq23 132 5e-26 seq22 127 2e-24 seq28 96.9 3e-15 >seq23 Length=328845 Score = 132 bits (146), Expect = 5e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| | || || ||| | || Sbjct 85750 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 85691 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| ||||| | ||||| Sbjct 85690 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 85631 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| ||||||||| ||||| || |||| ||||| ||| |||||||||| Sbjct 85630 CAGCGCCTGATTTTCGCGGGCAAGCAGCTTGAGGACGGTCGCACTCTCTCCGACTACAAC 85571 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || ||||| |||| || || ||||| || ||| Sbjct 85570 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGT 85535 Score = 122 bits (134), Expect = 9e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || ||||| ||||||||| | || |||||| | |||| | | | | |||| | | || Sbjct 85954 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCGTCCGATACCATCGACAACGTTAAGAGC 85895 Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386 || | ||| ||||| |||||||| ||| | ||||| || || || || | ||| ||||| Sbjct 85894 AAGA-TCCAAGACAAGGAGGGAATCCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAA 85836 Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 || || || |||| ||||||||| ||||||||||||||| ||||| |||| || || Sbjct 85835 GCAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCA 85776 Query 38447 TTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || ||| || | || || Sbjct 85775 CTTGGTCCTCCGTCTGCGTGGTGG 85752 Score = 100 bits (110), Expect = 3e-16 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || ||||| || |||| || ||| | | Sbjct 85066 ATGCAGATTTTCGTCAAGACCCTGACTGGAAAGACCATTACTCTCGAGGTTGAGTCTTCG 85007 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || || | || || ||||| || || | ||||| Sbjct 85006 GACACCATTGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCAGACCA 84948 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| |||||||| || | | | || || | ||||||||| Sbjct 84947 GCAGCGCCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGGAGGACGCTGAGCGACTACAA 84888 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| ||| || || || |||||||| ||| | | ||||||| Sbjct 84887 CATCCAGAAGGAGAGC-ACTCTTCACTTGGTGCTCCGTCTTCGTGGCGGCC 84838 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || || || || | || |||||| | | Sbjct 85294 ATGCAAATCTTCGTCAAGACCCTCACCGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 85235 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || |||| || || ||||| || || | ||||| Sbjct 85234 GATACCATCGATAACG-TCAAGTCCAAGATCCAAGATAAGGAGGGCATCCCACCGGACCA 85176 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| ||||||||| ||||| || || | |||||||| || ||||| Sbjct 85175 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGTCGCACCCTGTCTGATTACAA 85116 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| | ||||| ||| | || || || Sbjct 85115 CATCCAGAAGGAGTCTACGCTACATCTTGTTCTCCG 85080 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || ||||| || || ||||| || || || || | || || || | || Sbjct 85522 ATGCAGATTTTTGTAAAGACTCTTACGGGAAAGACGATTACGCTTGAGGTGGAATCATCC 85463 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || || | ||||| ||||| ||||| | ||||| Sbjct 85462 GATACCATTGATAACG-TCAAGTCGAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCA 85404 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || || || |||||||| || | |||||||| |||||||| Sbjct 85403 GCAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACAA 85344 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| | || ||||||||||| || ||| Sbjct 85343 CATTCAGAAGGAGTCCACCCTGCATTTGGTTCTCCGT 85307 >seq22 Length=330427 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || |||||||| || |||||| | || || ||| | || Sbjct 150607 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 150666 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || |||| ||||| |||||||||||| | ||||| Sbjct 150667 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 150726 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || |||| |||||||| ||||||||| Sbjct 150727 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 150786 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 ||||| ||||| | || || || ||||| ||| Sbjct 150787 ATCCAGAAGGAGTCCACCCTTCACTTGGTCCTG 150819 >seq28 Length=287958 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || | |||||||| ||||||||| | || |||||| || |||| | | Sbjct 243813 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 243754 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||||||||| | ||||| ||||| || Sbjct 243753 GACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCTCCGGACCAGCAGCGCCTG 243694 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || ||||| ||||| || || | ||||| || ||||||||||||||| ||| Sbjct 243693 ATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAAG 243634 Query 38433 G 38433 | Sbjct 243633 G 243633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170242866560