Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq103 232 8e-56 seq3 140 4e-28 seq58 132 6e-26 seq28 91.5 2e-13 >seq103 Length=121418 Score = 232 bits (256), Expect = 8e-56 Identities = 469/691 (68%), Gaps = 10/691 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||||||| || || || ||||| | ||||| || |||||||| Sbjct 99197 TCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCGGTGGACTTGACCTCGAAGATACCC 99138 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | ||| ||||| || || |||||||| || || || || || ||| Sbjct 99137 TCCTCGATGGTGAGGAGCGAGACATCGAAAGTTCCACCACCAAGATCGAAGATCAGGACG 99078 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || ||||| || |||||||| || ||||| || || || || || Sbjct 99077 TTGCGCTCACCCTCGACCTTCTTGTCAAGACCGTAAGCAATAGCAGCGGCGGTAGGCTCG 99018 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || ||| || || ||||| | ||||| || || || || || Sbjct 99017 TTGATGATACGGAGGACGTTGAGTCCGGCAATGAGACCGGCATCCTTGGTAGCCTGACGC 98958 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| ||||| || ||||| || || || |||| |||| | ||||| Sbjct 98957 TGGGAGTCGTTGAAGTAAGCTGGGACGGTGACAACGGCGTTGTTGACGGTTCCGCCGAGG 98898 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || || | || ||| ||| || | ||| || || ||||| || | | Sbjct 98897 TAGGCCTCAGCAGTCTCGCGCATCTTGACGAGGATCATGGAGGAGATCTCCTCGGGTGTG 98838 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTT--CAATCATGGGTTTATCCGCAGCACCGG 7874 || | || || || || || || || || | || | ||| || || | | | Sbjct 98837 AATTCCTTGGTCTCGCCCTTGAACTCGACCTGGCAGAC-TGGCTT--GCCTC--CCTTGT 98783 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 ||| | ||| | | | | ||||| ||| | ||||||| ||| | ||||| | Sbjct 98782 CGATGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCGGCGTCGGCGAACTTGC 98723 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 ||||| |||||||| || || || || ||||| | ||||||||||| |||||||| Sbjct 98722 GACCGATCAGACGCTTGGCGTCGAAGACGGTGTTGGTTGGGTTCATGGCGACTTGGTTCT 98663 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 | || || || ||||| ||||| || | || || || || ||| |||| ||||| | Sbjct 98662 TGGCGGCATCACCGATCAGACGCTC---GGTGTCAGTGAAGGCAACGAACGAGGGGGTTG 98606 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 | || || || |||||||| ||||| || || | |||||| | | ||| || |||| Sbjct 98605 TGCGGTTGCCCTGGTCGTTGGCAATGATCTCAATGCGGTCATCTCTGAAGATACCCACGC 98546 Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGAT 8145 |||| || || || || ||||| |||||||| Sbjct 98545 ACGAGTAGGTGGTACCCAAATCGATACCGAT 98515 >seq3 Length=657957 Score = 140 bits (154), Expect = 4e-28 Identities = 227/326 (70%), Gaps = 3/326 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||||||||| || || || ||||| | || || ||| || Sbjct 185254 TCGAAATCCTCACCACCCAAGTGGGTGTCACCGGCGGTAGAAAGAACCTCGAAGGCGCCA 185195 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | || ||||| || || || ||||| || || | || | | Sbjct 185194 CGGTCAATGGACAGGAGAGACACATCGAAGGTTCCTCCACCAAGATCGTA---GACAATG 185138 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | || | | | ||||||| |||||||| |||| ||| || || ||||| || Sbjct 185137 ATCTGACGCTCACCATCGGTCTTATCAAGACCGTAGGCGAGAGCGGCGGCGGTTGGCTCG 185078 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | ||| || ||| ||| || || ||||| | | ||||| || || || |||| Sbjct 185077 TTGACAATGCGGAGAACGTTAAGTCCGGCAATGATACCAGCATCCTTGGTGGCCTGTCTC 185018 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || ||||| |||||||| ||||| || ||||| |||| ||||| ||||||||||| Sbjct 185017 TGGTTGTCGTTGAAGTAGGCTGGGACGGTGACGACGGCGTGGGTGACCTTCTTACCGAGG 184958 Query 7757 TACGATTCCGCGATATCTTTCATTTT 7782 || || || |||| ||| ||||| || Sbjct 184957 TAAGACTCAGCGACATCCTTCATCTT 184932 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/182 (72%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| || |||||| || | ||||||||| || ||||| |||| || || || | | Sbjct 184695 GTGTTCTTTGGGTTCGCAGCGGCTTGGTTCTTGGCTGCGTCTCCGACCAGGCGCTCCTCA 184636 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | | || || |||||||| |||||||| ||| | ||||||||||| | | ||| Sbjct 184635 T---CGGTGAAGGCGACGTAAGATGGGGTAATTCTGTGACCTTGGTCGTTGACGAGAATC 184579 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143 || || |||| ||| || ||||| || || || || ||||| |||||||||||| Sbjct 184578 TCGACCTTTCCGTTCTGCATCACACCGACACAGGAGTAGGTGGTTCCCAAATCAATACCG 184519 Query 8144 AT 8145 || Sbjct 184518 AT 184517 >seq58 Length=184031 Score = 132 bits (146), Expect = 6e-26 Identities = 218/314 (69%), Gaps = 9/314 (3%) Strand=Plus/Minus Query 7445 AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACT 7504 ||||| | | ||||||||| | |||||||||||| || || || || || || ||||| Sbjct 90418 AGGAGGTTGGTATCGAAATCCTGACCACCCAAGTGGGTGTCACCAGCAGTGGCCTTGACG 90359 Query 7505 TCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCA 7564 ||||| ||| || | ||||| | | |||||||| || || |||||||| || || Sbjct 90358 GTAAAGACACCACCCTGGATGTTCAGGAGGGAAACATCGAAAGTTCCACCACCGAGATCG 90299 Query 7565 AAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT------ATCGAGACCGTACGCGATA 7618 | ||||| ||||| || | | | | ||| | |||||||||| || || Sbjct 90298 TAGATGAGAACGTTACGCTCCTTGGC---GGACTTTCCGGCACCGAGACCGTAAGCAATG 90242 Query 7619 GCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCA 7678 || || || || || || || || ||||| ||| ||| ||||||||||| | | || Sbjct 90241 GCGGCAGCGGTAGGCTCGTTGATGATACGGAGAACGTTGAGGCCAGCAATGGCACCGGCG 90182 Query 7679 TCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCC 7738 || || || ||||| || || ||||| ||||| || ||||| || | ||| || | Sbjct 90181 TCCTTGGTAGCTTGACGCTGGTTGTCGTTGAAGTAAGCTGGGACAGTGATGACGGCCTTG 90122 Query 7739 GTGACTTTCTTACC 7752 ||||| ||||| || Sbjct 90121 GTGACCTTCTTGCC 90108 >seq28 Length=287958 Score = 91.5 bits (100), Expect = 2e-13 Identities = 198/291 (68%), Gaps = 14/291 (5%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| |||||||||||||| || || || ||| | || || || || | || Sbjct 207226 ATCGAAATCCTCACCACCCAAGTGAGTGTCACCGTTGGTGGACTTAACCTCGAAAACGCC 207285 Query 7516 TCCTTCAATGTTT-AACAACG-AAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 |||| | | || |||| ||| ||| || || || ||||| || || | | Sbjct 207286 --CTTCTGGATCTCAAGAACGGAAATATCGAAGGTTCCTCCACCAAGATCGTAGACAGCG 207343 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | | | | || || || ||| || |||||||| || | ||| || || || || Sbjct 207344 ATGATTCTGTCCTCCTC------CTTCTCAAGACCGTATGCAAGAGCAGCGGCGGTAGGC 207397 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTT 7691 || || | | ||| ||| ||||||||||||||| ||| | ||||| || || |||| Sbjct 207398 TCGTTGACGACACGGAGAACGTTCAGGCCAGCAAT--TTGACCGGCATCCTTGGTGGCTT 207455 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGA 7742 | || || || ||||| ||||| || ||||| || || || |||| | ||| Sbjct 207456 GACGCTGGGAGTCGTTGAAGTAAGCTGGGACAGTGACAACGGCGTTCTTGA 207506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129552883560