Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq103 232 8e-56
seq3 140 4e-28
seq58 132 6e-26
seq28 91.5 2e-13
>seq103
Length=121418
Score = 232 bits (256), Expect = 8e-56
Identities = 469/691 (68%), Gaps = 10/691 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||||||||| || || || ||||| | ||||| || ||||||||
Sbjct 99197 TCGAAATCCTCACCACCCAAGTGAGTGTCACCGGCGGTGGACTTGACCTCGAAGATACCC 99138
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || ||| | | | ||| ||||| || || |||||||| || || || || || |||
Sbjct 99137 TCCTCGATGGTGAGGAGCGAGACATCGAAAGTTCCACCACCAAGATCGAAGATCAGGACG 99078
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| || | || ||||| || |||||||| || ||||| || || || || ||
Sbjct 99077 TTGCGCTCACCCTCGACCTTCTTGTCAAGACCGTAAGCAATAGCAGCGGCGGTAGGCTCG 99018
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || ||||| || ||| || || ||||| | ||||| || || || || ||
Sbjct 99017 TTGATGATACGGAGGACGTTGAGTCCGGCAATGAGACCGGCATCCTTGGTAGCCTGACGC 98958
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| || ||||| ||||| || ||||| || || || |||| |||| | |||||
Sbjct 98957 TGGGAGTCGTTGAAGTAAGCTGGGACGGTGACAACGGCGTTGTTGACGGTTCCGCCGAGG 98898
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| | || || | || ||| ||| || | ||| || || ||||| || | |
Sbjct 98897 TAGGCCTCAGCAGTCTCGCGCATCTTGACGAGGATCATGGAGGAGATCTCCTCGGGTGTG 98838
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTT--CAATCATGGGTTTATCCGCAGCACCGG 7874
|| | || || || || || || || || | || | ||| || || | | |
Sbjct 98837 AATTCCTTGGTCTCGCCCTTGAACTCGACCTGGCAGAC-TGGCTT--GCCTC--CCTTGT 98783
Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934
||| | ||| | | | | ||||| ||| | ||||||| ||| | ||||| |
Sbjct 98782 CGATGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCGGCGTCGGCGAACTTGC 98723
Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994
||||| |||||||| || || || || ||||| | ||||||||||| ||||||||
Sbjct 98722 GACCGATCAGACGCTTGGCGTCGAAGACGGTGTTGGTTGGGTTCATGGCGACTTGGTTCT 98663
Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054
| || || || ||||| ||||| || | || || || || ||| |||| ||||| |
Sbjct 98662 TGGCGGCATCACCGATCAGACGCTC---GGTGTCAGTGAAGGCAACGAACGAGGGGGTTG 98606
Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114
| || || || |||||||| ||||| || || | |||||| | | ||| || ||||
Sbjct 98605 TGCGGTTGCCCTGGTCGTTGGCAATGATCTCAATGCGGTCATCTCTGAAGATACCCACGC 98546
Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGAT 8145
|||| || || || || ||||| ||||||||
Sbjct 98545 ACGAGTAGGTGGTACCCAAATCGATACCGAT 98515
>seq3
Length=657957
Score = 140 bits (154), Expect = 4e-28
Identities = 227/326 (70%), Gaps = 3/326 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||||||||| || || || ||||| | || || ||| ||
Sbjct 185254 TCGAAATCCTCACCACCCAAGTGGGTGTCACCGGCGGTAGAAAGAACCTCGAAGGCGCCA 185195
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | || ||||| || || || ||||| || || | || | |
Sbjct 185194 CGGTCAATGGACAGGAGAGACACATCGAAGGTTCCTCCACCAAGATCGTA---GACAATG 185138
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| | || | | | ||||||| |||||||| |||| ||| || || ||||| ||
Sbjct 185137 ATCTGACGCTCACCATCGGTCTTATCAAGACCGTAGGCGAGAGCGGCGGCGGTTGGCTCG 185078
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| | ||| || ||| ||| || || ||||| | | ||||| || || || ||||
Sbjct 185077 TTGACAATGCGGAGAACGTTAAGTCCGGCAATGATACCAGCATCCTTGGTGGCCTGTCTC 185018
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| ||||| |||||||| ||||| || ||||| |||| ||||| |||||||||||
Sbjct 185017 TGGTTGTCGTTGAAGTAGGCTGGGACGGTGACGACGGCGTGGGTGACCTTCTTACCGAGG 184958
Query 7757 TACGATTCCGCGATATCTTTCATTTT 7782
|| || || |||| ||| ||||| ||
Sbjct 184957 TAAGACTCAGCGACATCCTTCATCTT 184932
Score = 96.9 bits (106), Expect = 4e-15
Identities = 131/182 (72%), Gaps = 3/182 (2%)
Strand=Plus/Minus
Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023
||||| || |||||| || | ||||||||| || ||||| |||| || || || | |
Sbjct 184695 GTGTTCTTTGGGTTCGCAGCGGCTTGGTTCTTGGCTGCGTCTCCGACCAGGCGCTCCTCA 184636
Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083
| | || || |||||||| |||||||| ||| | ||||||||||| | | |||
Sbjct 184635 T---CGGTGAAGGCGACGTAAGATGGGGTAATTCTGTGACCTTGGTCGTTGACGAGAATC 184579
Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143
|| || |||| ||| || ||||| || || || || ||||| ||||||||||||
Sbjct 184578 TCGACCTTTCCGTTCTGCATCACACCGACACAGGAGTAGGTGGTTCCCAAATCAATACCG 184519
Query 8144 AT 8145
||
Sbjct 184518 AT 184517
>seq58
Length=184031
Score = 132 bits (146), Expect = 6e-26
Identities = 218/314 (69%), Gaps = 9/314 (3%)
Strand=Plus/Minus
Query 7445 AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACT 7504
||||| | | ||||||||| | |||||||||||| || || || || || || |||||
Sbjct 90418 AGGAGGTTGGTATCGAAATCCTGACCACCCAAGTGGGTGTCACCAGCAGTGGCCTTGACG 90359
Query 7505 TCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCA 7564
||||| ||| || | ||||| | | |||||||| || || |||||||| || ||
Sbjct 90358 GTAAAGACACCACCCTGGATGTTCAGGAGGGAAACATCGAAAGTTCCACCACCGAGATCG 90299
Query 7565 AAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT------ATCGAGACCGTACGCGATA 7618
| ||||| ||||| || | | | | ||| | |||||||||| || ||
Sbjct 90298 TAGATGAGAACGTTACGCTCCTTGGC---GGACTTTCCGGCACCGAGACCGTAAGCAATG 90242
Query 7619 GCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCA 7678
|| || || || || || || || ||||| ||| ||| ||||||||||| | | ||
Sbjct 90241 GCGGCAGCGGTAGGCTCGTTGATGATACGGAGAACGTTGAGGCCAGCAATGGCACCGGCG 90182
Query 7679 TCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCC 7738
|| || || ||||| || || ||||| ||||| || ||||| || | ||| || |
Sbjct 90181 TCCTTGGTAGCTTGACGCTGGTTGTCGTTGAAGTAAGCTGGGACAGTGATGACGGCCTTG 90122
Query 7739 GTGACTTTCTTACC 7752
||||| ||||| ||
Sbjct 90121 GTGACCTTCTTGCC 90108
>seq28
Length=287958
Score = 91.5 bits (100), Expect = 2e-13
Identities = 198/291 (68%), Gaps = 14/291 (5%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||||||||| || || || ||| | || || || || | ||
Sbjct 207226 ATCGAAATCCTCACCACCCAAGTGAGTGTCACCGTTGGTGGACTTAACCTCGAAAACGCC 207285
Query 7516 TCCTTCAATGTTT-AACAACG-AAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573
|||| | | || |||| ||| ||| || || || ||||| || || | |
Sbjct 207286 --CTTCTGGATCTCAAGAACGGAAATATCGAAGGTTCCTCCACCAAGATCGTAGACAGCG 207343
Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
| | | | || || || ||| || |||||||| || | ||| || || || ||
Sbjct 207344 ATGATTCTGTCCTCCTC------CTTCTCAAGACCGTATGCAAGAGCAGCGGCGGTAGGC 207397
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTT 7691
|| || | | ||| ||| ||||||||||||||| ||| | ||||| || || ||||
Sbjct 207398 TCGTTGACGACACGGAGAACGTTCAGGCCAGCAAT--TTGACCGGCATCCTTGGTGGCTT 207455
Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGA 7742
| || || || ||||| ||||| || ||||| || || || |||| | |||
Sbjct 207456 GACGCTGGGAGTCGTTGAAGTAAGCTGGGACAGTGACAACGGCGTTCTTGA 207506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635129552883560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |