Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq23 159 8e-34 seq22 143 6e-29 seq28 120 7e-22 >seq23 Length=328845 Score = 159 bits (176), Expect = 8e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || |||||||| || ||||| ||||| || | || || | ||||| || |||||| Sbjct 85320 TGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCCAGCTGC 85379 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || ||||| || || || ||||| |||||||| || || ||||||||||| || Sbjct 85380 TTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGAATCTTC 85439 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||| |||||||| || || |||||| ||||| |||| ||||||||| || Sbjct 85440 GACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTTCCCGTA 85499 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | ||| ||||| || | ||||| Sbjct 85500 AGAGTCTTTACAAAAATCTGCAT 85522 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||||||| ||| || || || ||||| ||| || || |||||||| || ||||| Sbjct 84863 GTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCCAGCTG 84922 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || || || |||||||| || || || || || || ||||| || Sbjct 84923 CTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGTGGGATACCCTCCTTATCCTGAATCTT 84982 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| ||||||||||||||| || || || || |||| |||||||| || Sbjct 84983 GGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGT 85042 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | ||||| Sbjct 85043 CAGGGTCTTGACGAAAATCTGCAT 85066 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| || || || ||||| || || || |||||||| | || || | ||||| || Sbjct 85085 AACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCCTC 85144 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || ||||| || || || || ||||| || || ||||| || || ||||| Sbjct 85145 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTG 85204 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||||||| || ||||| ||||| || ||||| || |||| ||||| Sbjct 85205 GATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTT 85264 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || | || || ||||| | |||||| Sbjct 85265 TCCGGTGAGGGTCTTGACGAAGATTTGCAT 85294 Score = 116 bits (128), Expect = 8e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||| ||||| || ||||| ||||| |||| ||||| | || || || ||||| Sbjct 85547 GTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCAAGCTG 85606 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||| || || || || ||||| ||||||||||| || ||||| || || || Sbjct 85607 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 85666 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || || |||||||| || || || || | || | ||||| || || Sbjct 85667 CGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGT 85726 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 85727 GAGGGTCTTGACGAAGATCTGCAT 85750 >seq22 Length=330427 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 |||||||| || | |||||| |||||||| || || || ||||| || | ||| || | Sbjct 150825 GAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCG 150766 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 || || ||||||||||| || |||||||| || || || ||||| || ||||| || || Sbjct 150765 GCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTC 150706 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||| || || || |||||| || || || ||||| || ||||| |||||||| Sbjct 150705 CTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGT 150646 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || |||| || || ||||| | |||||| Sbjct 150645 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 150607 >seq28 Length=287958 Score = 120 bits (132), Expect = 7e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| |||| |||||| | ||||| ||||||||||| || || ||||| Sbjct 243635 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 243694 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| |||||||| || || |||||||| || || |||||| || || Sbjct 243695 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 243754 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || || || || || || |||||||| | ||||| || ||||| || || ||||| Sbjct 243755 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 243813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109475785969703