Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq46 82.4 9e-11 >seq46 Length=214393 Score = 82.4 bits (90), Expect = 9e-11 Identities = 283/439 (64%), Gaps = 2/439 (0%) Strand=Plus/Plus Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184 ||| || ||||| || || || | | || ||||| ||||| || || ||||| | | Sbjct 139768 CTCGAACTCATCGCCGTAGACGTCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGCGT 139827 Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA 48244 ||| || | | || | || | |||| || | ||| || ||||| ||||| || Sbjct 139828 CCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCATAGAGCGTAGAA 139887 Query 48245 TAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCAT 48304 || || | | | | ||| || ||||| ||| || | || || || || || | Sbjct 139888 CAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAGGTCCAGGAACTCAAA 139947 Query 48305 TATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCC 48364 | ||| ||||||||||| || | || || || | |||| || || || || || || Sbjct 139948 GACATCCGCATGCCATGGCTCGACGTAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACC 140007 Query 48365 TTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGA 48424 || || | ||||| ||||| ||||| | || | | ||| ||||| ||||| || || Sbjct 140008 CTGGTCGACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGGACGATACCGTTCGA 140067 Query 48425 TATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATAC 48483 | || ||||| || | ||| || ||| | || | ||| || | ||| | Sbjct 140068 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATGTTCAAT-C 140126 Query 48484 CTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTT 48543 | ||||| || || | || || || | ||||| || || || ||||| || || | Sbjct 140127 CGATACCTCCAGCAGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCT 140186 Query 48544 CTATACTATCATCTATCAT 48562 | |||||||| || |||| Sbjct 140187 CAATACTATCCTCCTTCAT 140205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562105926218760