Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq71 96.9 3e-15 >seq71 Length=163616 Score = 96.9 bits (106), Expect = 3e-15 Identities = 187/273 (68%), Gaps = 6/273 (2%) Strand=Plus/Minus Query 30114 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 30173 ||||||||| || ||| ||||| |||||| | | ||| ||||| || ||||| Sbjct 80612 CAGCTGATCAACGCCCTGCCCCGTGTAGTCCGTCTGGGCGTCTACGTACTTGGCGCCGAA 80553 Query 30174 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTC--GAAG 30231 |||||||||||||| ||||| || || || ||||| | ||||| | |||| ||| Sbjct 80552 GTGCCTCCACTGGAATCCGTAGACAGGGCCGAGGTCAC---CTTCCGCGCGCTCCGTAAG 80496 Query 30232 CCC-CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30290 ||| | || | || | | || |||||| ||||||||||||| | || || Sbjct 80495 CCCAATGCCATCGAGGTAGGCGCGCGATCCGTTGCCGTCCCAGATCTTGATGCCGGCTTC 80436 Query 30291 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 30350 |||||| |||| ||||| || |||| |||||| || ||||| | | |||||| Sbjct 80435 GGAGAGGGGGAGGGAGGAGGTGGAGCCACTGATGAACCAGAGGAGCTCGGCGAGGACGGC 80376 Query 30351 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 ||||| | |||||| |||||||| || Sbjct 80375 GCGGAGGAAGACGCGCTTGGTTGTGAGGAGCGG 80343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408615563168957