Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq46 268 2e-66 seq18 201 2e-46 >seq46 Length=214393 Score = 268 bits (296), Expect = 2e-66 Identities = 844/1289 (65%), Gaps = 63/1289 (5%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGA 221476 |||| |||| ||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 139247 GTCAAGGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGAACTTGGCCTCGGGA 139306 Query 221477 GAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 ||| ||| || | || || | | || | ||||| || ||||| || |||| | | Sbjct 139307 GAATCGAAAGGGAGGCGGAGAGCCAGGAATGCATCGGCAAGACCCTGGACACCGACAGCA 139366 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGC-------ACGGGATAAAAGTT 221589 | |||||||| | ||||| || ||||||| ||||| || |||| Sbjct 139367 ACTGGCCTGTGAC-------GGAAGTTGCTCTTTCTGGCCTCCGGGACGGGGTAGTAGTT 139419 Query 221590 GACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACC------ACCTCGGTCAG 221643 |||||| || | ||||| | |||| |||| |||| |||||| || Sbjct 139420 GACGTCAATGATCTTGTTCAAGTTCT------TGACAACAACCTGTGTGACCTCGTGAAG 139473 Query 221644 CTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAG 221703 ||||||| | | | | | ||| | | | | || ||| | | || Sbjct 139474 CTTCTGGAAGTCGTA-----AGT----GCCATTGGCCATG---TCGACATACGTCGGCAG 139521 Query 221704 GGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTC 221763 |||| | |||| |||||||||||||||||| || | | |||| | |||||| Sbjct 139522 AGCAAGGGATGCCAAGTTACACACGGCCACCTCATCTGGGGCAGAGTACTCGACGATCTC 139581 Query 221764 TGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGC 221823 || || |||||| || |||||| || |||| || || || |||||| ||| Sbjct 139582 CGTGCACAGGTTGGAGCTGCGGATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCA 139641 Query 221824 AGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTC 221883 ||| |||||||| | ||| || || || ||||| ||||| | | ||||| || Sbjct 139642 AGCATCCTTGTACAACATGAAAGGGTTTCCCGTCTCAGTCTGAGACTCGAGAATGGAGTA 139701 Query 221884 CCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGG 221942 ||| || | |||| || | | ||| | | |||||| ||| || || || Sbjct 139702 CCAAAGCT-TCTGTGCCTTGATGGTCTTGCGACCCTTACCCTC---CTTCTCGTAGCCCT 139757 Query 221943 TATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGAC 222002 |||||| || |||| || ||||| | || ||| || || || | ||| | Sbjct 139758 CGTAGAGCGCCTCGAACTCATCGCCGTAGACGTCTGCCAATCCAGGGCATTCGTTGGGGC 139817 Query 222003 ACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACA 222062 |||| || |||||| ||| | | || | || ||||||||| ||||||||||| | Sbjct 139818 ACATGAGCGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCATA 139877 Query 222063 GCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCA 222122 | || | || | || | || || |||||| ||||| ||| || ||||| |||| Sbjct 139878 GAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAGGTCCA 139937 Query 222123 AAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 |||||||| | || || ||||| ||||| | |||| ||| | || || || |||| Sbjct 139938 GGAACTCAAAGACATCCGCATGCCATGGCTCGACGTAGATGGCGAAGGCACCAGGGCGCT 139997 Query 222183 TGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACC 222241 ||||||||||||| || || || | ||| | |||||||| ||| || | || || Sbjct 139998 TGTTGCCACCCTGGTCGACGTATCT-TGCAGTGTTGTTGAAGACGCGGAGCATGGGGACG 140056 Query 222242 AGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC-- 222299 | ||||| || |||||||| || |||||| ||||| ||| | || ||| Sbjct 140057 ATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCAC---GGATACGG 140113 Query 222300 TGGCAG-ACATGCCGATACCACCGGC-GTGTTTCGAGATCATGGCGCAGCTCTTGAGAGT 222357 ||| | || |||||||| || || || ||| ||||||||||| ||| ||||||| || Sbjct 140114 TGGATGTTCAATCCGATACCTCCAGCAGTCTTT-GAGATCATGGCACAGGTCTTGAGTGT 140172 Query 222358 GTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTG 222417 ||| ||| ||||| ||| |||||||| | || | || || || ||||||| ||| Sbjct 140173 GTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTG 140232 Query 222418 AG-ATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAG 222476 | | ||||| | || || || || || || || |||||||| ||||| | || Sbjct 140233 GGCCTGTGGTGTACCA-GCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTCGAAG 140291 Query 222477 ACATCAGATCGTACGTCTCTA-CGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCG 222535 |||| || | ||| ||||| | | || | | || | || |||||||| || || Sbjct 140292 ACATGAGGTTGTATGTCTCGATAGTCT-TCTCAATATCCTCGCCGTGAATACCCACCGCA 140350 Query 222536 CATCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTG-GAGC--TGGAGAGCAGG 222592 | ||| ||||| ||| ||||||| ||| | ||||| | | | ||| ||| Sbjct 140351 ACACGCATAATCATGTGCTGCGGCCTCT---CAGCAACCTTGCCATCAAGGCGGAGGAGG 140407 Query 222593 TACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACC 222652 |||||| || ||||||||||| |||||||| | | || || || | | ||| | Sbjct 140408 TACGATCGCTCAAGAGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCACGGTCGTAGAGG 140467 Query 222653 ACGGCGGCGTCCAGCTCCGACTTGTGCTT 222681 ||||| | || |||||| | |||||| Sbjct 140468 ACGGCAGAGTTGAGCTCCTCCGCGTGCTT 140496 >seq18 Length=361580 Score = 201 bits (222), Expect = 2e-46 Identities = 554/853 (65%), Gaps = 14/853 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| || || |||||| || || ||||||||||| Sbjct 111538 ATCTGGCAGATGTACAAGAAGGCGGAAGCGTCTTTCTGGACAGCAGAGGAGATTGATCTC 111479 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594 |||||||| | ||| |||| || | ||| ||||| ||| | ||| | Sbjct 111478 TCCAAGGACCTTCACGACTGGAACAACCGCCTCAATGACGACGAGCGCTACTTCATCTCC 111419 Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || || ||||| || || || |||||||| || |||| | Sbjct 111418 CACGTTCTCGCTTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 111359 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| ||| || || ||| | || ||| || |||||||||||||| || ||| Sbjct 111358 TTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 111299 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||| | ||| || || || || || || ||||| | || Sbjct 111298 GAGAACATTCACGCCGAGACATACTCC---CTCCTCATTGACACATACATCAAGGAGCAA 111242 Query 25771 GCCGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 || | | | || || || |||||||||| ||| || ||||||||| |||||| Sbjct 111241 GCTCAACGCACATAC-CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGC 111183 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 ||||| | | ||||||| | || | || || | |||| || || || Sbjct 111182 CGACTGGGCAGTTAGGTGGATCCAAGATAAGGATTCCACTTTCGCTCAGCGTCTCGTTGC 111123 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 ||| ||||| || ||||| ||||| ||| |||||| || || |||| ||||||||||| Sbjct 111122 CTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGCTCAA 111063 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | || || |||| | || ||| ||| ||||||||||||||| | | |||||||| Sbjct 111062 GAAGCGTGGCCTCATGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGG 111003 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCA 26069 |||||||| || || |||||||| |||| | | ||| | ||| || | | Sbjct 111002 TCTCCACACTGACTTCGCCTGCCTCCTCTTCTC---CCATCTCAGACACCGCCCAAGTAA 110946 Query 26070 AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNN 26129 || ||||| | |||| | |||||||| |||||| ||||||| Sbjct 110945 GAAGGCCGTCCAAGACGTCATTACCGAGGCTGTCAGCATCGAGCAGGAGTTCTTGACTGA 110886 Query 26130 NNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTA 26189 | ||||||||| || | |||| ||||||||||||| Sbjct 110885 GGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGAGTT 110826 Query 26190 TGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCC 26249 || |||||| |||||| | || || || | ||||| || | ||||| Sbjct 110825 CGTCGCCGACAGGCTGCTGCTCTCCCTCGGTAACGAGAAGTACTACAAGGCGACCAACCC 110766 Query 26250 GTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGT 26309 || ||||| ||||| ||||| || ||| ||| |||||||||||||| || ||| | || Sbjct 110765 ATTTGACTTCATGGAGAACATCTCCCTGGCAGGAAAGACCAACTTCTTCGAGAAGCGCGT 110706 Query 26310 CGGCGACTATCAA 26322 | |||||| ||| Sbjct 110705 TGCCGACTACCAA 110693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928840051280960