Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq18 116 1e-20 seq14 111 5e-19 seq77 93.3 1e-13 >seq18 Length=361580 Score = 116 bits (128), Expect = 1e-20 Identities = 201/287 (70%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 133373 CTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAACGCCATTAG 133431 || ||||| || |||||||| || | || | ||||| || | ||||| ||||| | Sbjct 111268 CTCATTGACACATACATCAAGGAGCAAGCTCA-ACGCACATACCTCTTCAATGCCATC-G 111211 Query 133432 CGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGC 133490 || ||||||| || || ||||| | |||||||| ||| |||||||| || ||| Sbjct 111210 AGACCATTCCTTGCATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAGATAAGG 111151 Query 133491 GTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTG 133550 | | | ||| ||| ||||||||||| || |||| || ||||| || || ||| | Sbjct 111150 ATTCCACTTTCGCTCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCCG 111091 Query 133551 GTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTT 133610 || | ||| ||| ||||| ||||| || |||||||| | | |||| ||| || | Sbjct 111090 GTTCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCT 111031 Query 133611 CTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 | ||||| || || || | ||||||| || ||||| || || ||| Sbjct 111030 CCAACGAGCTCATCTCCCGTGACGAGGGTCTCCACACTGACTTCGCC 110984 >seq14 Length=379118 Score = 111 bits (122), Expect = 5e-19 Identities = 341/515 (66%), Gaps = 22/515 (4%) Strand=Plus/Plus Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 ||| ||||| |||||||| |||||||| ||||| || |||||||| || |||||||| | Sbjct 84434 TGCGCCGTGGGAAATCATGCAATCACGTTCCATCTCTCCGAAACGCAGTCCACCATCTCT 84493 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603 || | |||||| |||| || | || ||| | | || || ||| | | || Sbjct 84494 GGCACGACCCTCCACAGGTTGTCTCGTCAGAATTTGAGTTGGTCCTCTGGCTCTGGCGTG 84553 Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA--TG 251661 |||||||| |||||||| | |||||||||||| | | |||||| | ||| | || Sbjct 84554 GATCTTATCATCGACCATATGTCTCAGACGCTGGTAGTACGTGGGACCCAAGAACACCTG 84613 Query 251662 CTCGA-AGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTC 251720 | | | | || |||| || || | ||| ||||| || ||| ||| ||| | Sbjct 84614 CGCAACAAGC--TTGCGG-CCTGTGTGGCCGTGGTACATGACCTCGAAGCCACGAGACTG 84670 Query 251721 ATAACCAAGTTTCTGTAGCTCTGAAGCAA---TATCACCAATCTTGAATTTGCTAAAACT 251777 ||||| | | | || || | || | ||| || | || | | | || Sbjct 84671 GTAACCCATGTCACGAAGACGCGACGAAACGCTGTCAACAGT---GACATCGGTGAAGGG 84727 Query 251778 GGTGCCGTCTCCGTAAAGACCCATTTG--AATCAACACTTTGCCTAAAAGTGTCTCTTTC 251835 ||| |||| || | || || | | |||| ||| | | || | ||| || Sbjct 84728 AGTGGCGTCGCCCTCTTTTCCGATAAGCGAGGCAAC-CTTCGAC-AATTGACACTCAATC 84785 Query 251836 AGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTC 251895 | || || || ||||||||| ||||| || ||||| |||||||||| ||| || Sbjct 84786 AAATGAGCAATTGTCATACGAGATGGAATGGCGTGGGGGTTGATGATGAGGTCAGGCACA 84845 Query 251896 AGTCCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCC 251952 | || || |||||| |||||||||| ||| | ||| || | ||||| |||||| Sbjct 84846 ACACCCTCGCGAGTGAAAGGCATATCCT---CCTGGCGGTAAGTGATACCAATTGTTCCC 84902 Query 251953 TTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 || |||||||||||||| ||||||||||||||| Sbjct 84903 TTCTGTCCGTGACGAGAGGCGAACTTATCACCAAT 84937 >seq77 Length=158089 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| |||| ||||| ||| |||| ||||||||| Sbjct 63975 AGAATTTCCTTCAGACGCGGCACACCAAGGGTGACGTT---CTTAGACGACACACCAGCA 64031 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||||||||| || || | || |||| |||||||| ||| || || |||| Sbjct 64032 AAATGGAAAGTATTGAGCGTCATCTGCGTAGCAGGCTCACCGATAGACTGGGCGGCAAGA 64091 Query 301933 ATACCAACCATTTCTCCTGG 301952 ||||| ||||| || || || Sbjct 64092 ATACCGACCATCTCGCCAGG 64111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471809887215833