Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq18 143 4e-28 seq7 113 7e-19 seq6 105 1e-16 seq42 102 1e-15 seq46 100 5e-15 >seq18 Length=361580 Score = 143 bits (158), Expect = 4e-28 Identities = 232/329 (71%), Gaps = 5/329 (2%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||| | |||||| ||| ||||| | ||||||||| ||||| Sbjct 111002 ACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGCCATGAGGCCACGCTT 111061 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| || |||| ||| || ||||| ||||| ||||| ||||| || || Sbjct 111062 CTTGAGCCAGAAAATGGAGGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGCAGCGAA 111121 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | ||||| |||| || |||||| | || | | | | ||||||| | | ||||| Sbjct 111122 GGCAACGAGACGCTGAGCGAAAGTG--GAATCCTTATCT-TGGATCCACCTAACTGCCCA 111178 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTCT 794578 || ||||| ||| | | | || | || |||||||| ||||||| || | | | Sbjct 111179 GTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGCGT-T 111237 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | | ||||||| ||| ||||| |||||||| ||||| ||||| | ||| ||||| | Sbjct 111238 GAGCTTGCTCCTTGATGTATGTGTCAATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCT 111297 Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCAG 794667 |||| ||| ||||| || || |||||| Sbjct 111298 CGATCATGATTTGGAAACCGTAGAAGCAG 111326 Score = 122 bits (134), Expect = 1e-21 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || ||| | |||||| |||||| ||||||||||| || | || ||||| |||||| Sbjct 110697 TAGTCGGCAACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAGGGAGATGTTCTCCATG 110756 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | || ||||||| || | ||||| ||||||| ||||| || ||||| | | Sbjct 110757 AAGTCAAATGGGTTGGTCGCCTTGTAGTACTTCTCGTTACCGAGGGAGAGCAGCAGCCTG 110816 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 ||||||||||| |||||||| || ||| | | |||||||||||||| ||||| | Sbjct 110817 TCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACAG 110876 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139 || || | ||| | | ||||| | |||||| ||| |||||| | |||| Sbjct 110877 GGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGCTGACAGCCTCGGTAATGA 110928 >seq7 Length=466104 Score = 113 bits (124), Expect = 7e-19 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 2035614 GTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCC 2035673 ||||||||| | ||||| ||| | ||||| ||| ||||||||||||||||||||||| Sbjct 314100 GTCGACCAAGAGATGCTCTTCGAGATCATCCTGGCCTCCAACTACCTCGACATCAAGCCC 314159 Query 2035674 CTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGAC 2035733 || |||||| | || |||||||| ||||| || | || ||||| ||| || ||||| Sbjct 314160 CTTCTCGATGTCGGCTGCAAGACGGTGGCGAATATGATTAAGGGGAAGAGCCCGGAGGAG 314219 Query 2035734 ATCCGCAAGACCTTTAACAT 2035753 || | ||||| ||||| || Sbjct 314220 ATTAGGAAGACGTTTAATAT 314239 >seq6 Length=474936 Score = 105 bits (116), Expect = 1e-16 Identities = 167/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 2019204 GGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAG 2019263 || ||||| ||| | |||| ||||| ||||||||| || | ||||| | ||||| || Sbjct 382249 GGACGCCAAAAGCTTGTCATTCTCGACGAGGCCGACAGCATGACGTCTGGTGCCCAACAA 382190 Query 2019264 GCCCTCCGATCG-ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAA 2019322 ||||| || ||| |||||||| | ||| | || || || || || | || ||||| Sbjct 382189 GCCCTGCG-TCGCACCATGGAGATCTACTCTTCGACCACCCGCTTCGCATTCGCTTGCAA 382131 Query 2019323 CACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCG 2019382 ||| | | ||||||| |||| || ||||||||||||||||||| ||| | Sbjct 382130 TCAGTCCAACAAGATCATCGAGCCCCTGCAATCGCGTTGCGCCATCTTGCGCTATGCAAG 382071 Query 2019383 CCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGT 2019439 || || || || || ||| ||| |||| | |||||||||| || || ||||| Sbjct 382070 GCTAACGGATGCGCAAGTCGTGAAGCGCCTGCTCCAGATTATCGAGGCGGAGAAGGT 382014 >seq42 Length=223176 Score = 102 bits (112), Expect = 1e-15 Identities = 182/256 (71%), Gaps = 10/256 (4%) Strand=Plus/Plus Query 2411404 TCGCTGGCGCTCATCTT-GCCGTCCTTGGTGAGGCCCGGCACCAGCGGGTTGAGCAGGTG 2411462 || || ||||||||||| |||| ||| ||| ||||| | || | ||| | |||||| Sbjct 146176 TCACTCGCGCTCATCTTCGCCG-CCTCCCCGAGTCCCGGTATCATGGTGTTCATCAGGTG 146234 Query 2411463 G--ATGCGCTTGCGGTAGCCCA-GCGCCGGCAGGTGGTCGCGCGCAAAGGCAAAGATCTT 2411519 | || ||| ||| || | ||| || |||| || ||| |||| |||||||| Sbjct 146235 AGCACGCACTTT--GTATCCGATGCGTGGG-AGGTTCTCCATCGCGAAGGTGAAGATCTT 146291 Query 2411520 GCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTG 2411579 ||||||||| ||||| || || |||||||||||||||| ||||| || || || || Sbjct 146292 GCGCTGGTCTACGCCGCCGAATTGAGCGTCGACGTCGAGGTATTGCTCATCCAGCGCTTG 146351 Query 2411580 CATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTG-CGGTCCATCTTGACCACCTGGG 2411638 |||||| ||||| | || | |||| ||||| | |||| | ||| ||||||| | Sbjct 146352 CATGAGGGGGTAAATCAGTCCCCCCAGCGTCGGGTCGTCGGT-CTGCTTCACCACCTCCG 146410 Query 2411639 CGGCGGCCTTTTGCGC 2411654 | | ||||| ||||| Sbjct 146411 CTCCCGCCTTCTGCGC 146426 >seq46 Length=214393 Score = 100 bits (110), Expect = 5e-15 Identities = 177/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| || | || |||| ||| ||||||||||||||||| || | ||||| || Sbjct 140008 CTGGTCGACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGGACGATACCGTTCGA 140067 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | |||||||| || || | ||| || || | ||| || | ||| | || || Sbjct 140068 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATGTTCAATCC 140127 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || || || | ||| ||||| | || || | || || || || ||||| ||||| Sbjct 140128 GATACCTCCAGCAGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCTC 140187 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || || |||||||||| | || ||||| ||||| || | | | || || Sbjct 140188 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTGGTGTACC 140247 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||||||||||| || || Sbjct 140248 AGCATTGAAGAGTGTTGG 140265 Score = 89.7 bits (98), Expect = 8e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 2071819 GGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTC 2071878 ||||| | ||||| |||||||||| || | || || ||| || || || || Sbjct 139814 GGGCACATGAGCGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATC 139873 Query 2071879 CACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGG 2071938 || || |||| || | || || || ||| ||||||||||||||||||||| ||||| Sbjct 139874 CATAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAGG 139933 Query 2071939 TCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTG 2071998 || || | || | || || || ||||| ||||| | |||| ||| ||||| || | Sbjct 139934 TCCAGGAACTCAAAGACATCCGCATGCCATGGCTCGACGTAGATGGCGAAGGCACCAGGG 139993 Query 2071999 CGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 139994 CGCTTGTTGCCACC 140007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916202892804551