Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq23 100 3e-16 seq18 82.4 7e-11 >seq23 Length=328845 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||| | | | ||||| || |||||||||||||| || ||| || ||| || Sbjct 85313 AACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTC 85372 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| ||||| | | |||| || ||||| || || ||||| || || || || || Sbjct 85373 CAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTG 85432 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| || || | | || | ||||||| | ||||| || | ||| | ||| || Sbjct 85433 AATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTT 85492 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||| |||| ||||||||||| Sbjct 85493 TCCCGTAAGAGTCTTTACAAAAATCTGCAT 85522 >seq18 Length=361580 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 47046 GAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGC 47105 ||||| || |||||||| ||||||| || |||| ||| || ||| || |||| ||| Sbjct 110920 GAGGCTGTCAGCATCGAGCAGGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGGC 110861 Query 47106 ATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 47165 |||||||| | | ||| |||| |||||||| || || || | ||| || | Sbjct 110860 ATGAACGCCAACTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTGCTGCTCTCC 110801 Query 47166 CTCGGACAACCGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCG 47225 ||||| | ||| || | || || || || ||||| || ||| | ||||| || Sbjct 110800 CTCGGTAACGAGAAGTACTACAAGGCGACCAACCCATTTGACTTCATGGAGAACATCTCC 110741 Query 47226 CTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGT 47260 || | || || ||||| || |||||||| || || Sbjct 110740 CTGGCAGGAAAGACCAACTTCTTCGAGAAGCGCGT 110706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608763325240