Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq18 185 1e-40 seq46 118 2e-20 seq6 95.1 2e-13 >seq18 Length=361580 Score = 185 bits (204), Expect = 1e-40 Identities = 354/508 (70%), Gaps = 14/508 (3%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| || || || || ||||| || |||||| | || | Sbjct 111539 GATCTGGCAGATGTAC-AAGAAGGCGGAAGCGTCTTTCTGGACAGCAGAGGAGATTGATC 111481 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 || | ||| | ||||| ||| | | |||||||||||| | |||||| Sbjct 111480 TCTCCAAGGACCTTCACGACTGGAACAACCGCCTCAATGACGACGAGCGCTACTTCATCT 111421 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| ||||| ||| |||||||| || || || || ||||||||| || Sbjct 111420 CCCACGTTCTCGC-TTTCTTCGCCGCGTCTGACGGAATTGTCAACGAGAACCTCCTCGAG 111362 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | | |||||||| | ||||| || || | || ||||| ||||| ||| Sbjct 111361 CGCTTCAGCAGCGAGGTCCAGATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATG 111302 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 ||||| ||||| ||| | || || ||||| ||||| || ||||| ||| ||||||| | Sbjct 111301 ATCGAGAACATTCACGCCGAGACATACTCCCTCCTCATTGACACATACATCAAGGAGCAA 111242 Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130 | | | | || ||||||| |||||||| || | || | | | ||| ||||| Sbjct 111241 GCTCA-ACGCACATACCTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGC 111183 Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAGG-AGGGCCTCGACACTTT-GCCGAGCGGCTCG 1456188 ||||||||| | | ||||||| |||| | || || |||||| || |||| |||| Sbjct 111182 CGACTGGGCAGTTAGGTGGATC--CAAGATAAGGATTC--CACTTTCGCTCAGCGTCTCG 111127 Query 1456189 TCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGC 1456247 | | ||| || || || ||||| ||||| ||||| || ||| | |||| || |||| Sbjct 111126 TTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGC 111067 Query 1456248 TCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||| ||||||||| | || || Sbjct 111066 TCAAGAAGCGTGGCCTCATGGCTGGCCT 111039 Score = 86.0 bits (94), Expect = 9e-11 Identities = 169/245 (69%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGG 1456590 |||||| ||| |||||| | ||||| | | ||| | || || ||||| |||| Sbjct 110921 CGAGGCTGTCAGCATCGAGCAGGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGG 110862 Query 1456591 CATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCG 1456650 ||||||||||| | | ||| || |||||||| || ||||||||| | ||||| Sbjct 110861 CATGAACGCCAACT-TGATGAAGCAATACATTGAGTTC-GTCGCCGACAGGCTGCTGCTC 110804 Query 1456651 GCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGAT 1456710 | ||||| || ||||| ||||| | || ||||||| || | |||||| || Sbjct 110803 TCCCTCGGTAACG-AGAAGTACTACAAGGCGACCAACCCATTTGACTTCATGGAGAACAT 110745 Query 1456711 CTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCCAAGGCCGG 1456769 ||| || | || ||||||||||| |||||| |||| || ||| ||| ||| | || Sbjct 110744 CTCCCTGGCAGGAAAGACCAACTTCTTCGAGAAGCGCGTTGCCGACTACCAAAAGACTGG 110685 Query 1456770 CGTCA 1456774 |||| Sbjct 110684 TGTCA 110680 >seq46 Length=214393 Score = 118 bits (130), Expect = 2e-20 Identities = 181/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || || ||||| ||||| || || || | | ||| ||||| ||||| || | ||| Sbjct 140265 CCAACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCGTCCTGCTTCTTGGTCGAC 140206 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || ||||| ||||||||||| |||||| || || | ||||| Sbjct 140205 ATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACCTGTGCCATGATCTCA 140146 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| | || || || ||||| || | ||| | || ||| | || || ||| | Sbjct 140145 AAGACTGCTGGAGGTATCGGATTGAACATCCACCGTATCCGTGCCACTGGTGCATACATT 140086 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 || || |||||||| | || ||||| | || |||||||| ||||| || ||| |||| Sbjct 140085 GCCGGTACCAACGGAAACTCGAACGGTATCGTCCCCATGCTCCGCGTCTTCAACAACACT 140026 Query 260165 GCGCGCTACGTCGACCAG 260182 || | |||||||||||| Sbjct 140025 GCAAGATACGTCGACCAG 140008 Score = 116 bits (128), Expect = 5e-20 Identities = 355/541 (66%), Gaps = 22/541 (4%) Strand=Plus/Minus Query 262879 TGGGACTGGGACGCACTGCGGGCGTCGGTTCGA-CAGCATGGCCTGCGCAACTCGTTGCT 262937 |||||||||||| | || ||| | | || | ||||| || | |||||||| | || Sbjct 139134 TGGGACTGGGACTCTCTCAAGGCC-CAGATCAAGCAGCACGGTGTCCGCAACTCTCTCCT 139076 Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997 ||| || | ||||||||| ||| | || || |||||||| ||| || |||| ||||| Sbjct 139075 CGTCGCACCCATGCCCACAGCCTCCACCTCCCAGATCCTCGGCTTCAACGAGTGCTTCGA 139016 Query 262998 GGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCAA 263057 | | ||| ||||||||| | ||||| || || | ||||| || || ||||| Sbjct 139015 GCCCTACACCTCGAACATCTACTCCCGCCGTGTCCTGGCCGGCGAGTTCCAAGTCGTCAA 138956 Query 263058 CCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACCG 263117 || | || ||||| | | || | ||||| ||| | | || | |||| Sbjct 138955 CCCCTGGCTTCTCAAGGACCTCGTCGACATGGGCCTCTGGTCCGACAACATGAAGAACCG 138896 Query 263118 GCTCATTGCGGCACAG-GGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGATC 263176 |||| || | || | ||||| | ||| | | | || | || |||| Sbjct 138895 CATCATCGCCG-ACGGCGGCTCCATCCAGAACATCCCCAACA------TCCCCGCCGACA 138843 Query 263177 TCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG---ATATGG 263233 ||||||| |||| ||||||||| |||||| | || | || ||||| | | |||| Sbjct 138842 TCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGC---ACCATCGTCCAGATGG 138786 Query 263234 CGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACC 263293 | |||||||||| | | |||| || |||||| |||||| | || | |||| Sbjct 138785 CCGCCGACCGCGGCGCATTCATCGATCAATCCCAGTCCCTCAACATCCACATGAAGGACC 138726 Query 263294 CGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAGA 263350 | || || | ||| |||| || |||||| | | ||| | ||||||||||| Sbjct 138725 CCACAATGGGCAAGA---TCACATCCATGCACTTCGCCGGCTGGAAACTCGGCCTCAAGA 138669 Query 263351 CTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGATC 263410 | || |||||||| || |||||| | |||| || | |||| |||||||| ||||| | Sbjct 138668 CCGGAATGTACTACCTCCGCACCATGGCCGCATCCGCCCCCATCCAATTCACAGTCGACC 138609 Query 263411 A 263411 | Sbjct 138608 A 138608 >seq6 Length=474936 Score = 95.1 bits (104), Expect = 2e-13 Identities = 170/246 (69%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 332810 ACCTTTTCGGCGGCGACAATCTCGCGCAGGCGACCGGCGATTTGGGCGTCAGTGAGGCGC 332869 ||||| || || ||| ||||| | ||||||| ||| ||| || || || || | Sbjct 382014 ACCTTCTCCGCCTCGATAATCTGGAGCAGGCGCTTCACGACTTGCGCATCCGTTAGCCTT 382073 Query 332870 ACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTG 332929 || |||||| |||||| ||||| ||||||| |||||||| | | ||| ||| Sbjct 382074 GCATAGCGCAAGATGGCGCAACGCGATTGCAGGGGCTCGATGATCTTGTTGGACTGATTG 382133 Query 332930 CAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGT-CGACCGGAGGGCCTG 332988 || || | || || || || || | | | |||||||| |||| | ||||| || Sbjct 382134 CAAGCGAATGCGAAGCGGGTGGTCGAAGAGTAGATCTCCATGGTGCGAC-GCAGGGCTTG 382192 Query 332989 TTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTG 333048 |||||| | | ||| | || ||||||||||||||| |||| | ||| ||||| || || Sbjct 382193 TTGGGCACCAGACGTCATGCTGTCGGCCTCGTCGAGAATGACAAGCTTTTGGCGTCCTTG 382252 Query 333049 CGGCAG 333054 || || Sbjct 382253 GGGGAG 382258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177771751198258