Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq18 138 2e-27 >seq18 Length=361580 Score = 138 bits (152), Expect = 2e-27 Identities = 557/871 (64%), Gaps = 20/871 (2%) Strand=Plus/Plus Query 39310 TGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCC 39369 || ||| || || | |||||||| || ||||||| |||||||| || || || || || Sbjct 110675 TGCCATGACACCAGTCTTTTGGTAGTCGGCAACGCGCTTCTCGAAGAAGTTGGTCTTTCC 110734 Query 39370 TTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAA 39429 | ||| || || || |||||||| ||||| || || || || || || | || | Sbjct 110735 TGCCAGGGAGATGTTCTCCATGAAGTCAAATGGGTTGGTCGCCTTGTAGTACTTCTCGTT 110794 Query 39430 TCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACA 39489 || | | || || || || || || || |||||| ||||||| | Sbjct 110795 ACCGAGGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGC 110854 Query 39490 ATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTAC 39549 ||||| || | || | || || ||||| || | ||||| | |||||| || Sbjct 110855 GTTCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGCTGAC 110914 Query 39550 GGCCTCTGTTATTATCGATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGTTTA 39607 ||||| || || | || | || || ||| | ||| || | || | ||| Sbjct 110915 AGCCTCGGTAATGA-CG-TCTTGGACGGCCTTCTTACTTGGGCGGTGTCTGAGATGGGAG 110972 Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 || | | ||||||||||||| || || ||||| || | || | ||||| || Sbjct 110973 AAGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAG 111032 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || || |||| ||| || |||||||| |||||||| || |||| || || || || Sbjct 111033 AAGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAACCG 111092 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA 39787 || |||||||| || || || || || || ||||| || | || || || | | ||| Sbjct 111093 GAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAATCC 111152 Query 39788 TTA---TGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844 ||| || |||||| | |||||| || || |||||||| | ||||| || || || Sbjct 111153 TTATCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCG 111212 Query 39845 ATAGCATTAAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAG 39903 || ||||| ||||| | |||| || | | || || | ||||| || || | || Sbjct 111213 ATGGCATTGAAGAGGT-ATGTGCGTTGAGCTTGCTCCTTGATGTATGTGTCAATGAGGAG 111271 Query 39904 ACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGC 39963 || | || | || ||||| || ||| || || || ||||| || || | || Sbjct 111272 GGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGC 111331 Query 39964 TTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATC 40023 ||| | || || ||||| | || | || | || || || || ||||| || Sbjct 111332 TTCTGGGATCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTC 111391 Query 40024 ACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-- 40081 | ||||| || || || | || || || || || || || |||| | Sbjct 111392 AGACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCGTC----GTCATTGA 111447 Query 40082 -----TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACG 40136 || |||||||| | | || || || | ||| | || || |||||||| || | Sbjct 111448 GGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAG 111507 Query 40137 ACGCCTCTGCCTTTTTGTACATGTTCCATAT 40167 |||| || ||||| |||||||| | ||| || Sbjct 111508 ACGCTTCCGCCTTCTTGTACATCTGCCAGAT 111538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686905288178760