Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq46 223 4e-53 seq18 118 1e-21 >seq46 Length=214393 Score = 223 bits (246), Expect = 4e-53 Identities = 522/781 (67%), Gaps = 24/781 (3%) Strand=Plus/Minus Query 53170 TGGTGAGACGCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACT- 53228 || ||||| ||| ||| | | | ||||| || || ||||||| ||||| || || Sbjct 140383 TGCTGAGAGGCCGCAGCACATGATTATGCGTGTTGCGGTGGGTATTCACGGCGAGGATAT 140324 Query 53229 --ACACGCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCAC 53286 | | | | || ||||| ||| || | ||| || ||||| || ||||| | Sbjct 140323 TGAGAAGACTATC---GAGACATACAACCTCATGTCTTCGAAATACTTCACACACGCTTC 140267 Query 53287 GCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGC 53346 ||||| || ||||| |||||||| || | ||| ||||| ||||||| |||| | Sbjct 140266 CCCAACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCGTCCTGCTTCTTGGTCGA 140207 Query 53347 GATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTC 53406 |||||||| || || || || ||||| || || |||||| |||||| ||||| Sbjct 140206 CATGAAGGAGGATAGTATTGAGGGTATCTATGACACACTCAAGACCTGTGCCATGATCTC 140147 Query 53407 CAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGT--CCGTGCGAACGGCACACCA 53464 ||| | || |||||||| | || || | ||| |||||| | || || Sbjct 140146 AAAGACTGCTGGAGGTATCGGATTGAACA--TCCACCGTATCCGTGCCACTGGTGCATAC 140089 Query 53465 ATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAAC 53524 || || || ||||| | | | || ||||| || ||||||||||||||||||||| Sbjct 140088 ATTGCCGGTACCAACGGAAACTCGAACGGTATCGTCCCCATGCTCCGCGTCTTCAACAAC 140029 Query 53525 ACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTC 53584 || || | |||||| |||||||||| |||||| || | |||||||||||| || Sbjct 140028 ACTGCAAGATACGTCGACCAGGGTGGCAACAAGCGCCCTGGTGCCTTCGCCATCTACGTC 139969 Query 53585 GAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAA 53644 ||||| ||||| || || | | ||||| || || ||| | ||| || || | || Sbjct 139968 GAGCCATGGCATGCGGATGTCTTTGAGTTCCTGGACCTGAGAAAGAACCACGGCAAGGAG 139909 Query 53645 GAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAA 53703 || | || ||||||| |||| ||| ||||| ||||| ||||| ||||||||| | Sbjct 139908 GAAGTCCGTGCCCGTGACTTGTTCTAC-GCTCTATGGATCCCGGATCTCTTCATGAAGCG 139850 Query 53704 GGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGG 53763 || |||||| ||| || ||| || |||||||| ||||| ||||| || | | Sbjct 139849 TGTTGAGAAGAACGGCGACTGGACGCTCATGTGCCCCAACGAATGCCCTGGATTGGCAGA 139790 Query 53764 TGTCTACGGTGAGGAGTTTAACGAGATGTA-TCGGAC-----GTACGCAGTTCAGGGCCG 53817 |||||||| || ||||| | | | | || || | | | | | | |||| || Sbjct 139789 CGTCTACGGCGATGAGTTCGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGGTCG 139730 Query 53818 CTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGA 53877 | |||| ||||||| | || | ||| | | || ||| || ||| || Sbjct 139729 C------AAGACCATCAAGGCACAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGA 139676 Query 53878 GACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAA 53937 |||||||| || | ||||| ||||||||| | |||| ||||||||||||||||| Sbjct 139675 GACGGGAAACCCTTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAA 139616 Query 53938 C 53938 | Sbjct 139615 C 139615 >seq18 Length=361580 Score = 118 bits (130), Expect = 1e-21 Identities = 328/496 (66%), Gaps = 18/496 (4%) Strand=Plus/Plus Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864 ||||||| ||| || ||||||||||| | ||| || |||| ||||||||| |||| Sbjct 111039 AGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAACCGGAGAAG 111098 Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC 74924 ||||| || || || || ||||| || || || || ||||| | | ||| | || Sbjct 111099 AAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAATCCTTA-TC 111157 Query 74925 ----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGC 74980 ||||| | ||||| || || || |||| ||| | || ||||| || Sbjct 111158 TTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGC 111217 Query 74981 TTGGAAGAGGCTTG--CCTTCT-CTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGA 75037 | ||||||| || | || ||| | ||||||| | ||||||| | || || Sbjct 111218 ATTGAAGAGGTATGTGCGTTGAGCTT---GCTCCTTGATGTATGTGTCAATGAGGAGGGA 111274 Query 75038 GTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTC 75097 ||| ||||| | ||||| |||| | | ||| | ||||||| | || || || Sbjct 111275 GTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTC 111334 Query 75098 TGCAATCTGTACATCCTT--TGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCC 75155 || ||||| || || | |||| || | || ||||| |||| || ||||| Sbjct 111335 TGGGATCTGGACCTCGCTGCTGAAGCGCTCGAG--GAGGTTCTCGTTGACAATTCCGTCA 111392 Query 75156 GAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGT--- 75212 || |||||||| ||||| || || ||| |||| |||||| |||||| |||| Sbjct 111393 GACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCGTCGTCATTGAGGCGG 111452 Query 75213 TTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAACTCCCA 75272 |||| ||| || | |||||| | | |||||||||||| | ||||||||| | | Sbjct 111453 TTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGACGCT 111512 Query 75273 ATCGCCTTTTTGTACA 75288 |||||| ||||||| Sbjct 111513 TCCGCCTTCTTGTACA 111528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213202358200