Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq23 84.2 2e-11
>seq23
Length=328845
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| |||||||| || |||||||| || || ||||| |||| || ||| ||
Sbjct 85522 ATGCAGATTTTTGTAAAGACTCTTACGGGAAAGACGATTACGCTTGAGGTGGAATCATCC 85463
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| | || | || ||||| || || ||||| || ||| |||| ||| |
Sbjct 85462 GATACCATTGATAAC--GTCAAGTCGAAGATTCAAGACAAGGAGGGTATTCCTCCGGACC 85405
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
|||| || | || ||||| || || || |||| || | |||| | |||| || ||||
Sbjct 85404 AGCAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACA 85345
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||| || || ||| ||| ||||||||||| | ||| | ||||| ||
Sbjct 85344 ACATTCAGAAGGAGTCCACCCTGCATTTGGTTCTCCGTCTTCGTGGTGG 85296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355860626137143
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |