Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq22 181 2e-40
seq23 170 4e-37
seq28 134 3e-26
seq46 107 4e-18
>seq22
Length=330427
Score = 181 bits (200), Expect = 2e-40
Identities = 175/225 (78%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| ||||| ||||| | |||||| |||||||| || |||||||| || |||| |||
Sbjct 150831 TCCACGGAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAG 150772
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
||| | || || || ||||||||||| |||||||| ||||| || ||||| || ||||
Sbjct 150771 GGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAAT 150712
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
||| ||||||||||||||||| || || || ||||| ||||| || || |||||
Sbjct 150711 TCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTC 150652
Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| ||||| ||||| || ||||| || || | |||||
Sbjct 150651 AAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 150607
>seq23
Length=328845
Score = 170 bits (188), Expect = 4e-37
Identities = 171/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | || || |||||||| || || ||||| || |||| |||||
Sbjct 85301 ACGAAGACGGAGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGT 85360
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| ||||||||||| || || ||||| ||||| || ||||| ||||||| ||
Sbjct 85361 GCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACC 85420
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||| || ||||| || ||||| || ||||| || || ||| ||||| ||
Sbjct 85421 CTCCTTGTCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAG 85480
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| |||||||||||||| |||||||||||||| | ||||||
Sbjct 85481 CGTAATCGTCTTTCCCGTAAGAGTCTTTACAAAAATCTGCAT 85522
Score = 168 bits (186), Expect = 2e-36
Identities = 170/221 (77%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | ||||| | ||||||||| ||||| || || ||||| || || | || ||
Sbjct 85530 CGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTG 85589
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || || || ||||||||||| ||||| || ||||| || ||||| ||||||| ||
Sbjct 85590 CGACCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCC 85649
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||||||||| ||||| || ||||||||||| || |||||||| | |
Sbjct 85650 TCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAA 85709
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || ||||| ||||| || || | ||||||
Sbjct 85710 GTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 85750
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | |||||||||| ||| || |||||||| || || || ||
Sbjct 84845 ACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGT 84904
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
||| ||||| |||||||||||||| || ||||| ||||| || ||||| || || | ||
Sbjct 84905 CCTCCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGTGGGATACC 84964
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| ||||| ||||| || ||||| || |||||||| || |||||||||||
Sbjct 84965 CTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAG 85024
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || |||||||| || || ||||| || || | ||||||
Sbjct 85025 AGTAATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 85066
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| || || || ||||| || |||||||| ||||| | ||||| | |||||
Sbjct 85083 AGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCC 85142
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| ||||| || ||||| || ||||| || || | || ||||| ||
Sbjct 85143 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 85202
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| |||||||| || || || || || || || || |||
Sbjct 85203 TGGATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTC 85262
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| ||||| || || | |||||
Sbjct 85263 TTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 85294
>seq28
Length=287958
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | ||| || | |||||| || ||||||||||| || |||||
Sbjct 243635 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 243694
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || ||||| ||||||| ||| |||||||| |||||||| || || || |||
Sbjct 243695 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 243754
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| || || ||| || ||||| || ||||| ||||| ||||| | ||||| || ||
Sbjct 243755 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 243813
>seq46
Length=214393
Score = 107 bits (118), Expect = 4e-18
Identities = 193/281 (69%), Gaps = 6/281 (2%)
Strand=Plus/Plus
Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGC 178144
|||| |||||| ||||||||||| | ||||| ||||| |||||| ||||| ||
Sbjct 139610 CCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAA---GCATCCTTGTACAACATGAAAGGG 139666
Query 178145 ATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTC 178204
||||| ||||| |||| | |||||||| | |||||||| ||| || || |||
Sbjct 139667 TTTCCCGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGTGCCTTGATGGTC 139726
Query 178205 TTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAG 178264
|| | || || || |||||||| | ||||||| ||||||| || || |||
Sbjct 139727 TTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCCTCGAACTCATCGCCGTAG 139786
Query 178265 ACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTC 178324
|| || | | || || || |||||||| | ||| |||| | |||| | ||
Sbjct 139787 ACGTCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCA 139846
Query 178325 ACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
|| || ||||||||||| || | | |||| | || |||||
Sbjct 139847 ACACGCTTCATGAAGAGATCCGGGATCCATAGAGCGTAGAA 139887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159145925681285
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |