Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq22 181 2e-40 seq23 170 4e-37 seq28 134 3e-26 seq46 107 4e-18 >seq22 Length=330427 Score = 181 bits (200), Expect = 2e-40 Identities = 175/225 (78%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| ||||| ||||| | |||||| |||||||| || |||||||| || |||| ||| Sbjct 150831 TCCACGGAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAG 150772 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | || || || ||||||||||| |||||||| ||||| || ||||| || |||| Sbjct 150771 GGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAAT 150712 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||| ||||||||||||||||| || || || ||||| ||||| || || ||||| Sbjct 150711 TCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTC 150652 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| ||||| || ||||| || || | ||||| Sbjct 150651 AAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 150607 >seq23 Length=328845 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | || || |||||||| || || ||||| || |||| ||||| Sbjct 85301 ACGAAGACGGAGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGT 85360 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| ||||||||||| || || ||||| ||||| || ||||| ||||||| || Sbjct 85361 GCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACC 85420 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| || ||||| || ||||| || ||||| || || ||| ||||| || Sbjct 85421 CTCCTTGTCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAG 85480 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||||||||| |||||||||||||| | |||||| Sbjct 85481 CGTAATCGTCTTTCCCGTAAGAGTCTTTACAAAAATCTGCAT 85522 Score = 168 bits (186), Expect = 2e-36 Identities = 170/221 (77%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| | ||||||||| ||||| || || ||||| || || | || || Sbjct 85530 CGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTG 85589 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || ||||||||||| ||||| || ||||| || ||||| ||||||| || Sbjct 85590 CGACCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCC 85649 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||||||||| ||||| || ||||||||||| || |||||||| | | Sbjct 85650 TCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAA 85709 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| ||||| || || | |||||| Sbjct 85710 GTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 85750 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | |||||||||| ||| || |||||||| || || || || Sbjct 84845 ACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGT 84904 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 ||| ||||| |||||||||||||| || ||||| ||||| || ||||| || || | || Sbjct 84905 CCTCCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGTGGGATACC 84964 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| ||||| ||||| || ||||| || |||||||| || ||||||||||| Sbjct 84965 CTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAG 85024 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || |||||||| || || ||||| || || | |||||| Sbjct 85025 AGTAATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 85066 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || || || ||||| || |||||||| ||||| | ||||| | ||||| Sbjct 85083 AGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCC 85142 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || ||||| || ||||| || || | || ||||| || Sbjct 85143 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 85202 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||| || || || || || || || || ||| Sbjct 85203 TGGATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTC 85262 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| || || | ||||| Sbjct 85263 TTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 85294 >seq28 Length=287958 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||| || | |||||| || ||||||||||| || ||||| Sbjct 243635 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 243694 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| || ||||| ||||||| ||| |||||||| |||||||| || || || ||| Sbjct 243695 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 243754 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || || || ||| || ||||| || ||||| ||||| ||||| | ||||| || || Sbjct 243755 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 243813 >seq46 Length=214393 Score = 107 bits (118), Expect = 4e-18 Identities = 193/281 (69%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGC 178144 |||| |||||| ||||||||||| | ||||| ||||| |||||| ||||| || Sbjct 139610 CCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAA---GCATCCTTGTACAACATGAAAGGG 139666 Query 178145 ATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTC 178204 ||||| ||||| |||| | |||||||| | |||||||| ||| || || ||| Sbjct 139667 TTTCCCGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGTGCCTTGATGGTC 139726 Query 178205 TTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAG 178264 || | || || || |||||||| | ||||||| ||||||| || || ||| Sbjct 139727 TTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCCTCGAACTCATCGCCGTAG 139786 Query 178265 ACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTC 178324 || || | | || || || |||||||| | ||| |||| | |||| | || Sbjct 139787 ACGTCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCA 139846 Query 178325 ACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 || || ||||||||||| || | | |||| | || ||||| Sbjct 139847 ACACGCTTCATGAAGAGATCCGGGATCCATAGAGCGTAGAA 139887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159145925681285