Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq22 102 7e-17 seq23 89.7 4e-13 >seq22 Length=330427 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| ||| || || || || || || | ||| || || |||| || Sbjct 150815 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 150756 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || || ||||||||||| | ||| | | ||| |||||| | Sbjct 150755 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 150696 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || |||| | | | || ||| ||||||||| || | |||||| | || Sbjct 150695 ATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTG 150636 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||||| || || || ||||||||||| Sbjct 150635 CCCGTCAGGGTCTTCACGAAGATTTGCAT 150607 >seq23 Length=328845 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || || ||| || || || || || |||| || || || |||| ||| Sbjct 85542 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCA 85601 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| |||||||| || || || ||||||||||| | || | || ||| |||||| | Sbjct 85602 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 85661 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || ||| || | | | | || ||| |||||| || |||| ||||| | || Sbjct 85662 ATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 85721 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || ||||| ||||| Sbjct 85722 CCAGTGAGGGTCTTGACGAAGATCTGCAT 85750 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||||||||| ||| || || || || ||||| | || || || | || || ||||| Sbjct 85091 ATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCCTCGAGCTG 85150 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGT-CGGTGGGCACGCTCTCTTTGTCCATGATTT 39199 |||||||| || || || |||||||||| ||||||| | || ||| || || ||| | Sbjct 85151 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG-ATGCCCTCCTTATCTTGGATCT 85209 Query 39200 TCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 | |||| | | | ||||| |||||| || |||| ||| || | ||||| | Sbjct 85210 TGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGG 85269 Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284 | || || || || ||||||||||| Sbjct 85270 TGAGGGTCTTGACGAAGATTTGCAT 85294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429543458849417