Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq18 107 2e-18 >seq18 Length=361580 Score = 107 bits (118), Expect = 2e-18 Identities = 542/853 (64%), Gaps = 13/853 (2%) Strand=Plus/Plus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| |||||||| |||| || ||||| |||||||| || || || ||| | | Sbjct 110682 ACACCAGTCTTTTGGTAGTCGGCAACGCGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAGG 110741 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGA 4367 || || || ||||| || ||||| || || || || ||||| || ||| | | || Sbjct 110742 GAGATGTTCTCCATGAAGTCAAATGGGTTGGTCGCCTTGTA--GTACTTCTCGTTACCGA 110799 Query 4368 GCTACA--AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGA-GTTCGCAGTTA 4424 | | | |||| | ||| || || || || || || || |||| | ||| || ||| Sbjct 110800 GGGAGAGCAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGC-GTTC 110858 Query 4425 ATTCCAATTAATCTCACAGGTA-GCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGC 4483 || || | | | |||||| | | || | ||||| ||||| || || || | || || Sbjct 110859 ATGCCGAGCAG-CGCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGCTGACAGC 110917 Query 4484 TTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCA-AACA 4542 || || || | |||| | | ||| ||| | | || || | || | Sbjct 110918 CTCGGTAATGACGTCTTGGACGGCCTTCTTACTTGGGCGGTGT-CTGAGATGGGAGAAGA 110976 Query 4543 ATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACG 4602 | || || || ||| || | ||| ||||| | | || || ||||| || || | Sbjct 110977 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGG 111036 Query 4603 TTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAA 4662 | | || | ||| | || | ||| || ||||| || || | ||| || || || || | Sbjct 111037 TCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAACCGGAGA 111096 Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT 4722 |||| || || || ||||| || || || || | || |||| | | | || | Sbjct 111097 AGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAAGTGGAATCCTTAT 111156 Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782 ||| ||||| | | |||||||| || || ||||| | ||| ||||| || | || | Sbjct 111157 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGG 111216 Query 4783 CGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842 | || || | | | || | | | || | || || ||||| || || ||| | Sbjct 111217 CATTGAAGAGGTATGTGCGTTGAGCTTGCTCCTTGATGTATGTGTCAATGAGGAGGGAGT 111276 Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTG 4902 | | || | || || || || || || || || ||||| ||||| | ||||||| Sbjct 111277 ATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTG 111336 Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962 | || || ||| | | || | || | | ||| ||||| || || |||||| | Sbjct 111337 GGATCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACG 111396 Query 4963 CTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTTT 5019 | || || || || | ||| || || || ||||| | ||||| || || || | Sbjct 111397 CGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCGTCGTCATTGAGGCGGTTGT 111456 Query 5020 TCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCG 5079 |||||| | | | || || | | ||||| || || | ||||| || |||||||||| Sbjct 111457 TCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGACGCTTCCG 111516 Query 5080 CTTTTTTGTACAT 5092 | || |||||||| Sbjct 111517 CCTTCTTGTACAT 111529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427047471291197