Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq46 170 3e-37
seq18 113 6e-20
>seq46
Length=214393
Score = 170 bits (188), Expect = 3e-37
Identities = 405/612 (66%), Gaps = 0/612 (0%)
Strand=Plus/Plus
Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984
|| || ||||| || | || || |||||||||||||||| || |||||||| | | |
Sbjct 139769 TCGAACTCATCGCCGTAGACGTCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGCGTC 139828
Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044
||||| || | | || ||| || ||||| |||||||| || ||||||||||| ||
Sbjct 139829 CAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCATAGAGCGTAGAAC 139888
Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104
| || |||| | ||| || || || |||||| | || || || ||||| |
Sbjct 139889 AAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAGGTCCAGGAACTCAAAG 139948
Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164
| ||| | ||||||||| || | || || || | | ||||| || || || || |||
Sbjct 139949 ACATCCGCATGCCATGGCTCGACGTAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACCC 140008
Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224
|| || | ||||| || ||||| || | || | | ||| || | |||||||| ||
Sbjct 140009 TGGTCGACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGGACGATACCGTTCGAG 140068
Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284
|||| || || || | ||| || ||| | || || ||| ||| | ||
Sbjct 140069 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATGTTCAATCCG 140128
Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344
|| ||||| || |||| || || | || || || | ||| || |||||||||||
Sbjct 140129 ATACCTCCAGCAGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCTCA 140188
Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404
||||| || ||| |||||| | | || ||| |||| || || || ||
Sbjct 140189 ATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTGGTGTACCA 140248
Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTT 78464
||||| || | ||| || || || || || || |||| ||| | || ||||||||
Sbjct 140249 GCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTCGAAGACATGAGGTTGTATGTC 140308
Query 78465 TCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGC 78524
|| |||| || || ||| ||||| || ||||| |||||||| | ||| |||
Sbjct 140309 TCGATAGTCTTCTCAATATCCTCGCCGTGAATACCCACCGCAACACGCATAATCATGTGC 140368
Query 78525 TGAGGTCTTTCA 78536
|| || || |||
Sbjct 140369 TGCGGCCTCTCA 140380
>seq18
Length=361580
Score = 113 bits (124), Expect = 6e-20
Identities = 337/517 (65%), Gaps = 10/517 (2%)
Strand=Plus/Plus
Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
||||| || || || || || | ||| || ||||| || |||||||| || || | |||
Sbjct 111024 TCGTTGGAGAAGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCG 111083
Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302
|| || || || ||||| || || || ||||| || || || || | || || ||
Sbjct 111084 AAGGAACCGGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAA 111143
Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359
||| || || | | ||||||| |||||| || ||||||||||| | |||||
Sbjct 111144 GTGGAATCCTTATCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGA 111203
Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCA--TTGCTATCTTTAACGTAAGTAT 48417
|| || || || ||||| ||||| | | || | |||| || || | ||| || |
Sbjct 111204 ATGGTCTCGATGGCATTGAAGAGGTATGTGCGTTGAGCTTGC--TCCTTGATGTATGTGT 111261
Query 48418 CTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAA 48477
| || | || || | |||| |||||| || || || || || || ||||| |
Sbjct 111262 CAATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGA 111321
Query 48478 AACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTA 48537
| || | ||||||| |||||| ||||| | | || || || | ||||| || |
Sbjct 111322 AGCAGCGGGCTTCTGGGATCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGA 111381
Query 48538 CTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGG 48597
| ||||| ||| || || || || || | || || || || || |||| |
Sbjct 111382 CAATTCCGTCAGACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCGTCGT 111441
Query 48598 AAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCC 48654
| | | | || |||||||| | | || || || | ||| | || || |||||||
Sbjct 111442 CATTGAGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCC 111501
Query 48655 AAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691
| || || || || || || || ||||| | ||| ||
Sbjct 111502 AGAAAGACGCTTCCGCCTTCTTGTACATCTGCCAGAT 111538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694665248505760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |