Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq46 170 3e-37 seq18 113 6e-20 >seq46 Length=214393 Score = 170 bits (188), Expect = 3e-37 Identities = 405/612 (66%), Gaps = 0/612 (0%) Strand=Plus/Plus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 || || ||||| || | || || |||||||||||||||| || |||||||| | | | Sbjct 139769 TCGAACTCATCGCCGTAGACGTCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGCGTC 139828 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 ||||| || | | || ||| || ||||| |||||||| || ||||||||||| || Sbjct 139829 CAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCATAGAGCGTAGAAC 139888 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 | || |||| | ||| || || || |||||| | || || || ||||| | Sbjct 139889 AAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAGGTCCAGGAACTCAAAG 139948 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 | ||| | ||||||||| || | || || || | | ||||| || || || || ||| Sbjct 139949 ACATCCGCATGCCATGGCTCGACGTAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACCC 140008 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 || || | ||||| || ||||| || | || | | ||| || | |||||||| || Sbjct 140009 TGGTCGACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGGACGATACCGTTCGAG 140068 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284 |||| || || || | ||| || ||| | || || ||| ||| | || Sbjct 140069 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATGTTCAATCCG 140128 Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344 || ||||| || |||| || || | || || || | ||| || ||||||||||| Sbjct 140129 ATACCTCCAGCAGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCTCA 140188 Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404 ||||| || ||| |||||| | | || ||| |||| || || || || Sbjct 140189 ATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTGGTGTACCA 140248 Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTT 78464 ||||| || | ||| || || || || || || |||| ||| | || |||||||| Sbjct 140249 GCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTCGAAGACATGAGGTTGTATGTC 140308 Query 78465 TCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGC 78524 || |||| || || ||| ||||| || ||||| |||||||| | ||| ||| Sbjct 140309 TCGATAGTCTTCTCAATATCCTCGCCGTGAATACCCACCGCAACACGCATAATCATGTGC 140368 Query 78525 TGAGGTCTTTCA 78536 || || || ||| Sbjct 140369 TGCGGCCTCTCA 140380 >seq18 Length=361580 Score = 113 bits (124), Expect = 6e-20 Identities = 337/517 (65%), Gaps = 10/517 (2%) Strand=Plus/Plus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || || || || | ||| || ||||| || |||||||| || || | ||| Sbjct 111024 TCGTTGGAGAAGGTCAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCG 111083 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || || || ||||| || || || ||||| || || || || | || || || Sbjct 111084 AAGGAACCGGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCGAAA 111143 Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 ||| || || | | ||||||| |||||| || ||||||||||| | ||||| Sbjct 111144 GTGGAATCCTTATCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGA 111203 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCA--TTGCTATCTTTAACGTAAGTAT 48417 || || || || ||||| ||||| | | || | |||| || || | ||| || | Sbjct 111204 ATGGTCTCGATGGCATTGAAGAGGTATGTGCGTTGAGCTTGC--TCCTTGATGTATGTGT 111261 Query 48418 CTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAA 48477 | || | || || | |||| |||||| || || || || || || ||||| | Sbjct 111262 CAATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGA 111321 Query 48478 AACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTA 48537 | || | ||||||| |||||| ||||| | | || || || | ||||| || | Sbjct 111322 AGCAGCGGGCTTCTGGGATCTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGA 111381 Query 48538 CTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGG 48597 | ||||| ||| || || || || || | || || || || || |||| | Sbjct 111382 CAATTCCGTCAGACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCGTCGT 111441 Query 48598 AAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCC 48654 | | | | || |||||||| | | || || || | ||| | || || ||||||| Sbjct 111442 CATTGAGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCC 111501 Query 48655 AAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 | || || || || || || || ||||| | ||| || Sbjct 111502 AGAAAGACGCTTCCGCCTTCTTGTACATCTGCCAGAT 111538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694665248505760