Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq46 167 3e-36 >seq46 Length=214393 Score = 167 bits (184), Expect = 3e-36 Identities = 402/606 (66%), Gaps = 2/606 (0%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 || || ||||| || | || || |||| ||||| ||||| || || ||||| | | | Sbjct 139769 TCGAACTCATCGCCGTAGACGTCTGCCAATCCAGGGCATTCGTTGGGGCACATGAGCGTC 139828 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || || | | || ||| || ||||| |||||||| || ||||||||||| || Sbjct 139829 CAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCATAGAGCGTAGAAC 139888 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 | || |||| | ||| || || || |||||| | || || |||||||| | Sbjct 139889 AAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAGGTCCAGGAACTCAAAG 139948 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | ||| | ||||||||| || | || || || | |||| || || || || || ||| Sbjct 139949 ACATCCGCATGCCATGGCTCGACGTAGATGGCGAAGGCACCAGGGCGCTTGTTGCCACCC 140008 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | ||||| |||||||| || | || | | ||| || | || ||||| || Sbjct 140009 TGGTCGACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGGACGATACCGTTCGAG 140068 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 | || || || || | ||| || ||| ||||| ||| || | || Sbjct 140069 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATGTTCAATCCG 140128 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || ||||| || | || ||||| | |||||| || | |||||||||||| ||||| Sbjct 140129 ATACCTCCAGCAGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCTCA 140188 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 |||||||| ||| |||||| | | || ||| |||| || || || || Sbjct 140189 ATACTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTGGTGTACCA 140248 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 ||||| || | ||| || || || || ||||| |||| ||| | || |||||||| Sbjct 140249 GCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTCGAAGACATGAGGTTGTATGTC 140308 Query 77060 TCAATA-ACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATG 77118 || ||| || | || |||||| ||||| || || || |||||||| | ||| || Sbjct 140309 TCGATAGTCTTC-TCAATATCCTCGCCGTGAATACCCACCGCAACACGCATAATCATGTG 140367 Query 77119 CTGAGG 77124 ||| || Sbjct 140368 CTGCGG 140373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712930755122880