Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq22 125 2e-23 seq23 120 7e-22 seq28 86.0 1e-11 >seq22 Length=330427 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 |||||| ||||| | ||||| || ||||| || ||||||||||| || | | || | Sbjct 150825 GAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCG 150766 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||||||||| || | ||||||||||| | ||||| || Sbjct 150765 GCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTC 150706 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || |||||| | || | |||| || ||| || ||||| || Sbjct 150705 CTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGT 150646 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| |||||||| || ||||||||||||| ||||| Sbjct 150645 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 150607 >seq23 Length=328845 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| |||||||| || |||||||| || |||||||||||||| | | || | Sbjct 85076 GAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCG 85135 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || || ||||| || || | ||||||||||| | ||| || || Sbjct 85136 ACCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTC 85195 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | | | || || ||| ||||| || || Sbjct 85196 CTTATCTTGGATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGT 85255 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || || ||||| ||||| ||||||| ||||| Sbjct 85256 AATTGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 85294 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||| || ||||||||||| ||| | || |||||||| || | Sbjct 84860 CAAG-TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCCA 84918 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| || | ||||||||| | | ||| || ||||| || |||| Sbjct 84919 GCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGTGGGATACCCTCCTTATCCTGAA 84978 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | | |||| ||| ||| || || |||||||| || || | Sbjct 84979 TCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTC 85038 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||| ||||| | |||||| Sbjct 85039 CAGTCAGGGTCTTGACGAAAATCTGCAT 85066 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | |||||||| ||||| || || |||||||| |||| | ||| | || || Sbjct 85539 AGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCC 85598 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || ||||| || || | ||||||||||| | || || ||||| || Sbjct 85599 TCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 85658 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| | || | | |||| || ||| || || | ||| || || Sbjct 85659 TGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTC 85718 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||||| |||||| Sbjct 85719 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 85750 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| || || ||||| || || |||||||| || | | || | ||||| Sbjct 85310 GAGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATC 85369 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || || ||||| || | ||||||||||| | || || ||||| || Sbjct 85370 CTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTC 85429 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 |||||| || ||||| | || | | | || || || || ||||| ||||| || Sbjct 85430 TTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGT 85489 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| |||||||| || || | |||||| Sbjct 85490 CTTTCCCGTAAGAGTCTTTACAAAAATCTGCAT 85522 >seq28 Length=287958 Score = 86.0 bits (94), Expect = 1e-11 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||||||||| |||| | ||| | ||||| || || || || || ||||| Sbjct 243635 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 243694 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 || | ||||||||||| | ||||| ||||| ||||| || || |||||| | || Sbjct 243695 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 243754 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | | || || ||| || ||||| || || || |||||||| | ||||| |||||| Sbjct 243755 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAAG 243814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153814753618439