Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2 02016-06-24] 409 sequences; 35,517,105 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq22 152 4e-32 seq23 140 2e-28 seq28 102 6e-17 >seq22 Length=330427 Score = 152 bits (168), Expect = 4e-32 Identities = 168/222 (76%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||| |||| |||||| ||| |||||| ||||||||||| || | || ||| Sbjct 150824 AGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 150765 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 |||| || |||||||| ||||| ||||||| |||||||| || | || | || ||| Sbjct 150764 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCC 150705 Query 44240 TTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCG 44297 || ||| ||||| ||| || ||| | || ||||||| || |||||||| | | Sbjct 150704 TTGTCCTGGATCTTGGACTTGACATTGT--CGATAGTGTCGGACGACTCCACCTCAAGGG 150647 Query 44298 TAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 | || ||||| ||||| ||||||||||||||||||||||||| Sbjct 150646 TGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGA 150605 >seq23 Length=328845 Score = 140 bits (154), Expect = 2e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| |||||| ||||||||||| ||||||||||| ||| || | | | || || Sbjct 84857 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTC 84916 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || |||||||||| |||||||| |||| || | ||| ||||| ||| Sbjct 84917 CAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCTGGTGGGATACCCTCCTTATCCTG 84976 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | |||||||| | || || ||||| | ||||| ||||| Sbjct 84977 AATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTT 85036 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || |||||||| ||||| || ||||| Sbjct 85037 TCCAGTCAGGGTCTTGACGAAAATCTGCAT 85066 Score = 138 bits (152), Expect = 8e-28 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || |||||| || |||||||| |||| ||| ||| |||| || Sbjct 85542 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCA 85601 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || |||| |||||||| || | ||| | || ||||| ||| Sbjct 85602 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 85661 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | |||||||||| || || ||||||| || || ||||| Sbjct 85662 ATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 85721 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| |||||||| ||||| Sbjct 85722 CCAGTGAGGGTCTTGACGAAGATCTGCAT 85750 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| || || ||| |||||| || |||||||| || | || ||| | || ||| Sbjct 85314 ACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 85373 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || |||||||||| |||||||| || | ||| | ||| ||||| || Sbjct 85374 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGA 85433 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | ||||| |||| ||||||||||| | ||||||||||||| Sbjct 85434 ATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTT 85493 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || ||||| || || || ||||| Sbjct 85494 CCCGTAAGAGTCTTTACAAAAATCTGCAT 85522 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || ||||| |||||| |||||||||||||| | || ||| | || || Sbjct 85086 ACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGACCATCCTCG 85145 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || |||| |||||||| || | || | || ||||| || Sbjct 85146 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGG 85205 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | ||||| || | || || || |||| |||||| |||||| Sbjct 85206 ATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTT 85265 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| |||||||||||||| Sbjct 85266 CCGGTGAGGGTCTTGACGAAGATTTGCAT 85294 Score = 86.0 bits (94), Expect = 5e-12 Identities = 132/186 (71%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || |||||| ||||||||||| |||| ||| ||| |||| || Sbjct 85770 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 85829 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||||| ||| ||||| || | || | || ||||| || Sbjct 85830 AGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGG 85889 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| || ||| | ||||| |||| || || ||||| | || || ||||| Sbjct 85890 ATCTTGCTCTT-AACGTTGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATGGTCTT 85948 Query 44308 TCCCGT 44313 || || Sbjct 85949 GCCAGT 85954 >seq28 Length=287958 Score = 102 bits (112), Expect = 6e-17 Identities = 134/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| |||| || ||| | || || |||||||| || ||||||| Sbjct 243633 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 243692 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||| |||||||| || | ||| | || ||||| || |||||| ||| || ||| Sbjct 243693 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 243752 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || || |||| ||| || ||||| | || || ||||| ||||| | |||||| || Sbjct 243753 --CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGAC 243810 Query 44326 GAAG 44329 |||| Sbjct 243811 GAAG 243814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988605560353