Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20verrucosus_20[genbank_20GCA_5F001662655.1_202016-
06-24] 151 sequences; 30,174,856 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq23 134 9e-27
seq36 107 1e-18
seq61 82.4 5e-11
>seq23
Length=411311
Score = 134 bits (148), Expect = 9e-27
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | || |||| ||| | ||| || ||||| ||||||||||||||
Sbjct 115401 CCACCGCGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 115342
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| |||| ||||||||| |||||||| || ||||||||||| ||
Sbjct 115341 AGAGTGCGACCGTCCTCCAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 115282
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | | || | |||| ||| || ||
Sbjct 115281 ATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACC 115222
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||||| ||||| ||||| || || || |||||||||||
Sbjct 115221 TCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 115175
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || || |||| ||| || ||||| ||||||||||| ||||| ||| | ||
Sbjct 115842 AGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCC 115783
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| |||||||| || ||||||||||| || | || |||||| ||
Sbjct 115782 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 115723
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | ||| | ||| ||||| || | ||| || ||
Sbjct 115722 TGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCTAGCGTAATTGTC 115663
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| |||||||| || || || ||||| |||||
Sbjct 115662 TTTCCGGTGAGGGTCTTAACGAAGATTTGCAT 115631
Score = 96.9 bits (106), Expect = 2e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| ||||| ||| | || ||||||||||| || || ||
Sbjct 115593 TCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCCAACTGCTTACCGGCAAAG 115534
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || ||||||||||| || | | ||||||||| ||||| ||| | |
Sbjct 115533 ATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTA 115474
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||||| ||||| || || | ||| || || || || || ||||| || |||
Sbjct 115473 TCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTTCCCGTAAGAGTCTTGACA 115414
Query 34379 AAGATCTGCAT 34389
|| ||||||||
Sbjct 115413 AAAATCTGCAT 115403
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | || |||| ||| | || || ||||| ||||||||||||||
Sbjct 115173 CCACCGCGAAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 115114
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | |||||||| ||||| || || || |||||||| |||
Sbjct 115113 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 115054
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | ||||| ||| |||||
Sbjct 115053 ATTCCCTCCTTGTCTTGGATCTTGCTCTTAACGTTGTCGATGGTATCGGACGACTCGACC 114994
Query 34343 TCCACCGTGATGGTTTTGCCGGT 34365
|| | |||||||| ||||| ||
Sbjct 114993 TCAAGGGTGATGGTCTTGCCAGT 114971
>seq36
Length=342305
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || ||||| |||| ||| | || || ||||| |||||||| || ||
Sbjct 275777 CCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAA 275718
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | ||||||||| ||||| || || ||||||||||| |||
Sbjct 275717 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 275658
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | || | | || | ||||| ||| || ||
Sbjct 275657 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACC 275598
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||| || ||||| || || || ||||| ||||| |||||
Sbjct 275597 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 275551
>seq61
Length=176788
Score = 82.4 bits (90), Expect = 5e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261
||||| |||||||||||||| || || | || || | ||||||||| || || ||
Sbjct 115882 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 115941
Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321
|| ||||||||||| || | | ||||||||| ||||| ||| | || | |
Sbjct 115942 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 116001
Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381
|| | ||||| || ||||| || | |||||||| ||||| || | || || || |||
Sbjct 116002 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAAG 116061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071405446560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |