Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20verrucosus_20[genbank_20GCA_5F001662655.1_202016- 06-24] 151 sequences; 30,174,856 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq21 96.9 7e-15 seq45 89.7 1e-12 >seq21 Length=459134 Score = 96.9 bits (106), Expect = 7e-15 Identities = 298/455 (65%), Gaps = 7/455 (2%) Strand=Plus/Minus Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336 |||||||| || | || |||||||| ||| | || |||||||||||||||| |||| Sbjct 140915 TTCGCCATCTACGTTGAGCCATGGCACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAG 140856 Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396 ||| ||||||| ||| | | || |||||| | ||||||| || ||| | | || Sbjct 140855 AACCACGGCAAGGAGGAAGTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATTCCGGAT 140796 Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCT-TTCTCCGTCCGACGC 249455 | |||||| || ||| || ||||||| ||||| || | | | || | | || Sbjct 140795 CTCTTCATGAAGCGTGTCGAGAAGAACGGCGACTGGACCCTCATGTGCCCCAACGAATGC 140736 Query 249456 CCCGGACCTCATCGATCTACACGGCGCCGACTTCGACCAAGCCTATAAGAAATACGAATC 249515 || ||| | ||| | |||||| || ||||| ||| || ||||| Sbjct 140735 CCTGGA-TTGGCAGATGTTTACGGCGATGAGTTCGAGGCGCTCTACGAGGGCTACGAGAA 140677 Query 249516 CAACGGCATCG---GCAAGACAATCAAGGCTCGGACCCTTTTTGCGAAGGTGGTGGAGTC 249572 | || | | ||||||| |||||||| | || |||| | | ||||| Sbjct 140676 GGAGGGTAAGGGTCGCAAGACTATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTC 140617 Query 249573 CCAGATAGAGACAGGGGGGCCGTATTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTA 249631 |||| |||||| || || | | || |||| ||| || || |||||| |||||| | Sbjct 140616 TCAGACTGAGACA-GGAAACCCTTTCATGTTGTACAAGGATGCCTGCAACCGCAAGAGCA 140558 Query 249632 ACCAACGGCATCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACT 249691 |||| | | || |||||||||||| || || || || ||||| | | | |||| Sbjct 140557 ACCAGAAGAACCTCGGTACCATCCGCAGCTCCAACCTGTGCACAGAGATTGTCGAGTACT 140498 Query 249692 CGTCCAAGGAGGAGATTGCCGTCTGCAACCTGGCA 249726 | || || ||| ||||||| || ||| ||||| Sbjct 140497 CTGCCCCAGATGAGGTTGCCGTGTGTAACTTGGCA 140463 >seq45 Length=268339 Score = 89.7 bits (98), Expect = 1e-12 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 254201 CTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCA 254260 ||| ||||| | |||| || | ||||| |||||||| |||| ||||||| || ||||| Sbjct 116374 CTGCCCGCCCTACAAGATCATCATCCTCGACGAGGCAGACAGCATGACGCAAGATGCGCA 116315 Query 254261 GTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTG 254320 | ||| || ||||| |||||||||||| | | |||||||| || ||||||| Sbjct 116314 GAGCGCGCTGCGCCGCACGATGGAGACGTATAGTAAGATCACGCGTTTCTGTTTGGTGTG 116255 Query 254321 CAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATT 254377 || || || ||| ||| || | ||| |||| ||| ||| ||||| || || Sbjct 116254 TAATTATGTCACGAGGATTATTGATCCGTTGGCCAGTCGATGCAGTAAGTTCCGCTT 116198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073764322597568