Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20verrucosus_20[genbank_20GCA_5F001662655.1_202016-
06-24] 151 sequences; 30,174,856 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq23 98.7 8e-16
seq36 82.4 6e-11
>seq23
Length=411311
Score = 98.7 bits (108), Expect = 8e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCG-CTCGTCCT 48575
||| || ||||| |||||||||||||| |||||||| || || | ||| | | ||||
Sbjct 116068 CACCAAGTGAAGCGTGCTCTCCTTTTGGATGTTGTAGTC-GCTCAGCGTCCTCCCATCCT 116010
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
| |||||||| || || |||| | |||||||| ||| || | || ||||| |||
Sbjct 116009 CGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCT 115950
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
||| || ||||| | ||||| || | |||||| ||||| || ||||| |
Sbjct 115949 GAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCT 115890
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| ||||| | || || || |||||||||||
Sbjct 115889 TTCCGGTCAAGGTCTTGACGAAAATCTGCAT 115859
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577
|| ||||| || || |||||| ||||||||||| || | || || | ||||||
Sbjct 115611 ACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 115552
Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637
| |||||||||| | | || | |||||||| ||| || | || |||||||| |
Sbjct 115551 AACTGCTTACCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGA 115492
Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697
|| ||| ||||| | |||||||||| || ||| ||| | || || || ||
Sbjct 115491 ATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTT 115432
Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| || ||||| || ||||||||||||||
Sbjct 115431 CCCGTAAGAGTCTTGACAAAAATCTGCAT 115403
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTC 48576
|| || ||||| || |||||| ||||||||||| || | | | || || |||||||
Sbjct 115383 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTG-CGACCGTCCTC 115325
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
||||||||| || || |||| | |||||||| ||| || | | |||||||||
Sbjct 115324 CAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTG 115265
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
|| ||| ||| | | | ||||| |||| ||||| ||| | || ||||| ||
Sbjct 115264 GATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTT 115205
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| ||||| || || || || ||||||||
Sbjct 115204 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 115175
>seq36
Length=342305
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
|||||| || | || | || || ||||| ||| |||||| || ||||||||||| |
Sbjct 275778 ACCTCCACGAAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCG- 275720
Query 48559 CAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617
|| || || | ||||| |||||||| ||| || | || | |||||||| ||| |
Sbjct 275719 AAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGG 275660
Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677
| | | ||||||||| || || ||||| | | || ||||||| ||||||
Sbjct 275659 GGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCA 275600
Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | || || || || || || || || ||||| || || |||||
Sbjct 275599 CCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 275551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421250424766151
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |