Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20verrucosus_20[genbank_20GCA_5F001662655.1_202016- 06-24] 151 sequences; 30,174,856 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq16 96.9 7e-15 seq4 84.2 4e-11 >seq16 Length=504691 Score = 96.9 bits (106), Expect = 7e-15 Identities = 132/179 (74%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 280184 CAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCCACTGA 280243 ||| ||||| || ||||| || || ||||| ||||||||||||||| ||| ||| | Sbjct 287631 CAACGGTGCCGGAAAGTCCACTCTCATCAAGCTCCTGACTGGCGAGA-CCATCCCAACCA 287573 Query 280244 GGGGTCCGT-TTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTC 280301 || |||| ||| |||||| |||||| |||| || | |||| || |||||||| | Sbjct 287572 CTGG-CCGTGTTGAGAAGCACCCCAACTTGCGTATTGGTTACATCAAGCAGCACGCCCTT 287514 Query 280302 CACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTATGC 280360 | ||| | |||| || || || | ||| || ||||| ||| | |||||||| ||||| Sbjct 287513 GAGCACGTGGAGATGCATCTCGAGAAGACCCCCAACCAGTACCTCCAGTGGCGTTATGC 287455 >seq4 Length=888112 Score = 84.2 bits (92), Expect = 4e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| ||| | || || |||| ||||| ||||| ||| Sbjct 128035 GGTGAGGATCTGTGCAACTGCACCTTCAACTTGGCCTACGGTGCCAAGATCCTGCTCAAC 127976 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| ||| | | ||||||||| | || || ||||| ||| || || || | Sbjct 127975 CAGACCCATCTCCGCCTGAAGCGTGGCCAGCGTTACGGTCTTTGCGGACCTAACGGTTCC 127916 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| |||||| ||||||||||| |||| ||| | || || || || || Sbjct 127915 GGAAAGTCCACTCTCATGCGCGCCATCAACAACGAGCAGGTCGAGGGTTTCCCCAAGAAG 127856 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 ||||| | ||| |||| || ||||||||| | ||||| Sbjct 127855 AGCGAGGTCAAGACCGTGTTCGTCGAGCACGACCTTGACTC 127815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027834811456991