Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20verrucosus_20[genbank_20GCA_5F001662655.1_202016- 06-24] 151 sequences; 30,174,856 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq23 113 5e-20 seq36 107 2e-18 >seq23 Length=411311 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| || | ||||| || |||| || |||||||| || ||||| Sbjct 115366 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCCAGCTGCTTGCCCGCGAA 115307 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 115306 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATT 115247 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| ||| || || || | |||||||| |||||||| || ||||| || Sbjct 115246 GTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGAC 115187 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 115186 GAAGATCTGCAT 115175 Score = 100 bits (110), Expect = 3e-16 Identities = 156/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| || | |||||||||||||| || ||||| || ||| |||| | | Sbjct 116074 ACGGAGCACCAAGTGAAGCGTGCTCTCCTTTTGGATGTTGTAGTCGCTCAGCGTCCTCCC 116015 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| || ||||| || || ||||||||||| | ||| | | |||||| Sbjct 116014 ATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTT 115955 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 42170 ||| ||| | || | |||| ||| | | | ||||| || || || |||| || Sbjct 115954 ATCC-TGAATCTTGGACTTGA-CGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTA 115897 Query 42171 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || || | ||||| || || || ||||| Sbjct 115896 ATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 115859 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||||||||| || |||||| ||||| ||||| || | ||| || || | || || Sbjct 115611 ACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 115552 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 | ||||||||| || || || || ||||||||||| | || | | |||||||| | || Sbjct 115551 AACTGCTTACCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGT-CTTG 115493 Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 | | || | |||| | | | || ||| |||||||| || | ||| || || || Sbjct 115492 AATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTT 115433 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || ||||| ||||| || ||||| Sbjct 115432 TCCCGTAAGAGTCTTGACAAAAATCTGCAT 115403 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| |||| ||| || || | || || |||||||| || ||||| Sbjct 115822 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAA 115763 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | ||| | || |||||| || ||| || |||| | Sbjct 115762 AATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTTAGACTTGACGTT 115703 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | || || ||| || || || | ||| || || || || || || ||||| || Sbjct 115702 ATCGATGGTATCCGACGACTCGACTTCTAGCGTAATTGTCTTTCCGGTGAGGGTCTTAAC 115643 Query 42197 AAAGATTTGCAT 42208 ||||||||||| Sbjct 115642 GAAGATTTGCAT 115631 >seq36 Length=342305 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| |||||| || || |||||||| | || || || | || || Sbjct 275759 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 275700 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || ||||| || || ||||||||||| | || | | |||||||||| | Sbjct 275699 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGG 275640 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 || || |||| | | | || ||| ||| ||||| || | ||||| || ||| Sbjct 275639 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 275580 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || ||||| || ||||||||||| Sbjct 275579 CCCGTCAGGGTCTTCACGAAGATTTGCAT 275551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543211774685840