Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20verrucosus_20[genbank_20GCA_5F001662655.1_202016-
06-24] 151 sequences; 30,174,856 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq23 113 5e-20
seq36 107 2e-18
>seq23
Length=411311
Score = 113 bits (124), Expect = 5e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| ||||| ||||| || | ||||| || |||| || |||||||| || |||||
Sbjct 115366 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCCAGCTGCTTGCCCGCGAA 115307
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || ||||||||||| | || | || |||||||||| ||| || || | |
Sbjct 115306 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATT 115247
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | |||||| ||| || || || | |||||||| |||||||| || ||||| ||
Sbjct 115246 GTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGAC 115187
Query 42197 AAAGATTTGCAT 42208
||||| |||||
Sbjct 115186 GAAGATCTGCAT 115175
Score = 100 bits (110), Expect = 3e-16
Identities = 156/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||| || | |||||||||||||| || ||||| || ||| |||| | |
Sbjct 116074 ACGGAGCACCAAGTGAAGCGTGCTCTCCTTTTGGATGTTGTAGTCGCTCAGCGTCCTCCC 116015
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
|| || |||||||| || ||||| || || ||||||||||| | ||| | | ||||||
Sbjct 116014 ATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTT 115955
Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 42170
||| ||| | || | |||| ||| | | | ||||| || || || |||| ||
Sbjct 115954 ATCC-TGAATCTTGGACTTGA-CGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTA 115897
Query 42171 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || || || | ||||| || || || |||||
Sbjct 115896 ATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 115859
Score = 96.9 bits (106), Expect = 4e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||||||||| || |||||| ||||| ||||| || | ||| || || | || ||
Sbjct 115611 ACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 115552
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
| ||||||||| || || || || ||||||||||| | || | | |||||||| | ||
Sbjct 115551 AACTGCTTACCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGT-CTTG 115493
Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
| | || | |||| | | | || ||| |||||||| || | ||| || || ||
Sbjct 115492 AATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTT 115433
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || ||||| ||||| || |||||
Sbjct 115432 TCCCGTAAGAGTCTTGACAAAAATCTGCAT 115403
Score = 89.7 bits (98), Expect = 6e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| |||| ||| || || | || || |||||||| || |||||
Sbjct 115822 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAA 115763
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || ||||||||||| | ||| | || |||||| || ||| || |||| |
Sbjct 115762 AATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGGATCTTAGACTTGACGTT 115703
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | || || ||| || || || | ||| || || || || || || ||||| ||
Sbjct 115702 ATCGATGGTATCCGACGACTCGACTTCTAGCGTAATTGTCTTTCCGGTGAGGGTCTTAAC 115643
Query 42197 AAAGATTTGCAT 42208
|||||||||||
Sbjct 115642 GAAGATTTGCAT 115631
>seq36
Length=342305
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| || | ||| |||||| || || |||||||| | || || || | || ||
Sbjct 275759 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 275700
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| || ||||| || || ||||||||||| | || | | |||||||||| |
Sbjct 275699 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGG 275640
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179
|| || |||| | | | || ||| ||| ||||| || | ||||| || |||
Sbjct 275639 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 275580
Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || ||||| || |||||||||||
Sbjct 275579 CCCGTCAGGGTCTTCACGAAGATTTGCAT 275551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543211774685840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |