Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20verrucosus_20[genbank_20GCA_5F001662655.1_202016-
06-24] 151 sequences; 30,174,856 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq23 125 7e-24
seq36 82.4 8e-11
>seq23
Length=411311
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | ||| ||||| | | | |||||||| |||||||||||||| |
Sbjct 115629 CCACCGCGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAC 115570
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||| | || ||||||| | |||| || ||||| |||||||||||
Sbjct 115569 AGGGTGCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGA 115510
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| || ||||| ||| | || | || | | || | ||| |||| || |||||
Sbjct 115509 ATACCCTCCTTGTC-TTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCAC 115451
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | ||| | ||| || || || ||||| || ||||||||||||||
Sbjct 115450 CTCAAGCGTAATCGTCTTTCCCGTAAGAGTCTTGACAAAAATCTGCAT 115403
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||||||| | ||| || |||||| || || || || |
Sbjct 115368 GACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCCAGCTGCTTGCCCGCG 115309
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
| || || ||||| ||||||||||| || || || ||||| ||| || || | |
Sbjct 115308 AAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACA 115249
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | |||||||| |||||| ||||| | || | || || || || || || ||
Sbjct 115248 TTG-TCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTT 115190
Query 138600 TACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 115189 GACGAAGATCTGCAT 115175
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
||||||||| |||||||||||||||| || | | |||||||| || || || | |
Sbjct 116050 CTCCTTTTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTGCCCGCGAA 115991
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540
|| || ||||| |||||||| || ||||| || || || ||| | || | || | |
Sbjct 115990 AATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATC-CTGAATCTTGGACTTGACGT 115932
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
|| || | |||||| | ||||| ||||||| || | || || || |||| || ||
Sbjct 115931 TG-TCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCGGTCAAGGTCTTG 115873
Query 138601 ACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 115872 ACGAAAATCTGCAT 115859
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/207 (70%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | || || || | | | |||||||| || ||||||||||||
Sbjct 115173 CCACCGCGAAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 115114
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || |||||| ||||| || |||| |||| ||||| || |||||||| ||
Sbjct 115113 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 115054
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || || ||||| || | || | |||| ||| || | ||| |||| |||||| |
Sbjct 115053 ATTCCCTCCTTGTC-TTGGATCTTGCTCTTAACGTTG-TCGATGGTATCGGACGACTCGA 114996
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCA 138592
|||| | || | || || |||||||
Sbjct 114995 CCTCAAGGGTGATGGTCTTGCCAGTCA 114969
>seq36
Length=342305
Score = 82.4 bits (90), Expect = 8e-11
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||| || | || || |||||||| || || ||||
Sbjct 275744 GACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCG 275685
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
|||| || ||||| |||||||| || || || || ||||| ||| || || | |
Sbjct 275684 AAGATCAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACA 275625
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
|||| | | || |||| |||||||||||| | || | || || || ||||| || ||
Sbjct 275624 TTGT-CGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTT 275566
Query 138600 TACAAAAATCTGCATGGCT 138618
|| || || |||||| ||
Sbjct 275565 CACGAAGATTTGCATGACT 275547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261463304720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |