Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20verrucosus_20[genbank_20GCA_5F001662655.1_202016- 06-24] 151 sequences; 30,174,856 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq23 134 1e-26 seq36 93.3 3e-14 >seq23 Length=411311 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || || ||| || ||||| ||||| || || || | || | || ||| Sbjct 115611 ACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 115552 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 ||||||||||||||||| ||||| ||||| || |||| |||| ||||||||||| | Sbjct 115551 AACTGCTTACCGGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGA 115492 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | | || || | |||||||| | ||||||||| ||| Sbjct 115491 ATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTT 115432 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| | ||| || |||||||||||||| Sbjct 115431 CCCGTAAGAGTCTTGACAAAAATCTGCAT 115403 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || ||| || ||||| ||||| || || ||| | ||| |||| ||| Sbjct 115383 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCC 115324 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || ||||| ||||| || |||| |||| |||||||||||| Sbjct 115323 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 115264 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | || |||| ||| ||||||| || || || || Sbjct 115263 ATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 115204 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| | || || || || |||||||| Sbjct 115203 CCCGTGAGGGTCTTGACGAAGATCTGCAT 115175 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 |||||| | || || | |||||| || ||||||||||| ||||| || ||||| || Sbjct 116086 GCCGCCACGAAGACGGAGCACCAAGTGAAGCGTGCTCTCCTTTTGGATGTTGTAGTCGCT 116027 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | | | || || | |||||| || || || ||||| ||||| || |||| || Sbjct 116026 CAGCGTCCTCCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGG 115967 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | |||||||| || |||||| || || | | | || || | ||| || Sbjct 115966 GATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAAC 115907 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| | ||||| || ||||| ||||| || || || ||||||||||| Sbjct 115906 CTCGAGAGTAATGGTCTTTCCGGTCAAGGTCTTGACGAAAATCTGCAT 115859 >seq36 Length=342305 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||| || || || |||||||| || || | || | || || Sbjct 275759 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 275700 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| ||||| || ||||| ||||| || |||| ||| | ||||||||||| Sbjct 275699 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGG 275640 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | || || |||| ||||||||| | || || || || Sbjct 275639 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 275580 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||||| || || || || || ||||| Sbjct 275579 CCCGTCAGGGTCTTCACGAAGATTTGCAT 275551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380936898955773