Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20verrucosus_20[genbank_20GCA_5F001662655.1_202016- 06-24] 151 sequences; 30,174,856 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 132 1e-25 seq69 111 5e-19 seq3 91.5 4e-13 >seq1 Length=1768408 Score = 132 bits (146), Expect = 1e-25 Identities = 226/328 (69%), Gaps = 0/328 (0%) Strand=Plus/Minus Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598 || || ||||| |||||| | ||| | ||||||| | ||||| | |||||| Sbjct 128121 TTCCTGACGGTTCCATCATACTTGACCATGACATCTTCCAAAGCCTTGACGAGACGACGT 128062 Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658 ||||| ||||||||| | || || ||||| |||||||| ||||| |||||||| || Sbjct 128061 TGAATGTAACCAGTTTCGGCAGTCTTGACAGCGGTATCAATGAGACCCTCACGACCAGCC 128002 Query 302659 ATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAA 302718 || || |||||||| | ||| || || || | | | ||| ||||||| || Sbjct 128001 ATGGCGTGGAAGAAGAACTCAGATGGAGTGAGACCTCTCAGGTACGAGTTCTCAACAAAG 127942 Query 302719 CCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAG 302778 ||||| | |||||| || | || ||| || || ||||||||||| | || || | Sbjct 127941 CCACGAGACTCGGGAGAGTAATCATCCTTTGTGAAATGTGGCAGGGTGCGGTACTTGAAT 127882 Query 302779 CCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAA 302838 ||| | || |||||||| || ||||| ||||||||| | | | ||||||| || Sbjct 127881 CCGAAAGGAATACGCTTACCCTCAACAGACTGCTGTCCGACAAGGGCAGTCATCTGGGAG 127822 Query 302839 ATATTTAAATCACTGCCCTTGGAGCCAG 302866 ||||| | | |||||||| |||| Sbjct 127821 ATATTGATAGTGGAACCCTTGGAACCAG 127794 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| | || ||||| |||||||| ||||| ||| Sbjct 128868 AGAATTTCCTTTAGACGCGGCACACCAAGTGTGACGTT---CTTGGACGACACACCGGCA 128812 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||||||||| || || | || |||| |||||||| ||| ||| || |||| Sbjct 128811 AAATGGAAAGTATTGAGCGTCATCTGCGTAGCAGGCTCACCGATAGATTGGGCGGCAAGA 128752 Query 301933 ATACCAACCATTTCTCCTGG 301952 ||||| ||||| || || || Sbjct 128751 ATACCGACCATCTCGCCGGG 128732 >seq69 Length=149700 Score = 111 bits (122), Expect = 5e-19 Identities = 200/287 (70%), Gaps = 4/287 (1%) Strand=Plus/Plus Query 133373 CTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAACGCCATTAG 133431 || || || || |||||||| || | || | ||||| || | ||||| ||||| | Sbjct 52635 CTCATCGACACATACATCAAGGAGCAGGCTCA-ACGCACATACCTCTTCAATGCCATC-G 52692 Query 133432 CGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGC 133490 || |||||||||| || ||||| | |||||||| ||| |||||||| || ||| Sbjct 52693 AGACCATTCCTTGTATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAGATAAGG 52752 Query 133491 GTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTG 133550 | | | |||||| ||||||||||| || |||| || ||||| || || ||| | Sbjct 52753 ATTCTACCTTTGCTCAGCGTCTCGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCCG 52812 Query 133551 GTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTT 133610 | | ||| ||| ||||| ||||| || |||||||| | | |||| ||| || | Sbjct 52813 GCTCCTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTGACCTTCT 52872 Query 133611 CTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 | ||||| || || || | || |||| || |||||||| || ||| Sbjct 52873 CGAACGAGCTCATCTCCCGTGATGAGGGTCTCCACACCGACTTCGCC 52919 >seq3 Length=965780 Score = 91.5 bits (100), Expect = 4e-13 Identities = 113/152 (74%), Gaps = 6/152 (4%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || || ||||||||| ||||| || ||||| |||||||||| ||| || | Sbjct 492049 TGAGCAATCGTCATACGAGAAGGAATGGCGTGGGGGTTGATGATGAGGTCAGGCACAACA 491990 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCCTTT 251955 || || |||||| |||||||||| ||| | ||| | | ||||| ||||| || Sbjct 491989 CCCTCGCGAGTGAAAGGCATATCCT---CCTGGCGGTAAGTAATACCAATTGTTCCTTTC 491933 Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||||| ||||||||||||||| Sbjct 491932 TGTCCGTGACGAGAGGCGAACTTATCACCAAT 491901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471814752492887