Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20verrucosus_20[genbank_20GCA_5F001662655.1_202016-
06-24] 151 sequences; 30,174,856 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq23 154 4e-32
seq1 113 1e-19
seq61 84.2 7e-11
>seq23
Length=411311
Score = 154 bits (170), Expect = 4e-32
Identities = 175/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||||||||| || | | ||||| | ||| || || ||||| || ||||| || |
Sbjct 115637 TTTGCATACCACCGCGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGT 115578
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || ||||| || | || || || |||||||| || || ||||| |
Sbjct 115577 AGTCCGACAGGGTGCGGCCATCCTCCAACTGCTTACCGGCAAAGATCAGGCGCTGCTGGT 115518
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| |||||||| || || || || ||||| || | || || |||||||| | ||| ||||
Sbjct 115517 CCGGAGGAATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATG 115458
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || ||||| |||| |||||||| || || || || ||||||||||||||
Sbjct 115457 ATTCCACCTCAAGCGTAATCGTCTTTCCCGTAAGAGTCTTGACAAAAATCTGCAT 115403
Score = 141 bits (156), Expect = 3e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | ||||||||||| || |||||||| || || || || || ||
Sbjct 115861 CATACCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAGTC 115802
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
||| | || || ||||| || || || || || || || || || || ||||| || ||
Sbjct 115801 AGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGG 115742
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || ||||| || || |||| || || ||||| || | ||| || | ||
Sbjct 115741 TGGGATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTC 115682
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || |||| |||||||||||| || || || || || || |||||
Sbjct 115681 GACTTCTAGCGTAATTGTCTTTCCGGTGAGGGTCTTAACGAAGATTTGCAT 115631
Score = 96.9 bits (106), Expect = 1e-14
Identities = 147/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589
|||| ||||| || ||| ||||| || || || || | || | |||||| || |
Sbjct 116065 CAAG-TGAAGCGTGCTCTCCTTTTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGA 116007
Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649
| || || || || || || || || ||||| || || || || || || ||||||||||
Sbjct 116006 GCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAA 115947
Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709
| || | || || || ||||| | || || | ||||| || || |||| |||||||
Sbjct 115946 TCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTC 115887
Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||| | || || || |||||||||||
Sbjct 115886 CGGTCAAGGTCTTGACGAAAATCTGCAT 115859
Score = 93.3 bits (102), Expect = 1e-13
Identities = 147/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||||||||| || | | || || | || || || ||||| || || || || || ||
Sbjct 115177 CATACCACCGCGAAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 115118
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || || |||||||| || || || ||||| ||||||||||| || ||
Sbjct 115117 GGAGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGG 115058
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685
|||||||| || || || || || || ||| || || || || || | ||| || | |
Sbjct 115057 GGGAATTCCCTCCTTGTCTTGGATCTT-GCTCTTAACGTTGTCGATGGTATCGGACGACT 114999
Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713
| || ||||| || | ||||| || ||
Sbjct 114998 CGACCTCAAGGGTGATGGTCTTGCCAGT 114971
>seq1
Length=1768408
Score = 113 bits (124), Expect = 1e-19
Identities = 217/320 (68%), Gaps = 0/320 (0%)
Strand=Plus/Minus
Query 378127 CCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGTCATATCA 378186
||||| ||||| || |||||||||||| | | | | ||| || || || ||||
Sbjct 128163 CCATCCTCTCCGTAGATGAATTGAACAATGTCACCAAGAGAGTTCCTGACGGTTCCATCA 128104
Query 378187 TATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCAGTTTGA 378246
|| | ||||| | |||||| || || || | || || || ||| ||||||||||
Sbjct 128103 TACTTGACCATGACATCTTCCAAAGCCTTGACGAGACGACGTTGAATGTAACCAGTTTCG 128044
Query 378247 CTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAAT 378306
||| || || || |||||||| | ||| |||||||| |||| || |||||||| ||
Sbjct 128043 GCAGTCTTGACAGCGGTATCAATGAGACCCTCACGACCAGCCATGGCGTGGAAGAAGAAC 127984
Query 378307 TCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCTGGCGAA 378366
|||| ||||| || || | | | || |||||| ||| || | | | || ||
Sbjct 127983 TCAGATGGAGTGAGACCTCTCAGGTACGAGTTCTCAACAAAGCCACGAGACTCGGGAGAG 127924
Query 378367 TCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTT 378426
| ||||| ||||| |||| || | || || | || || || | ||||| || ||
Sbjct 127923 TAATCATCCTTTGTGAAATGTGGCAGGGTGCGGTACTTGAATCCGAAAGGAATACGCTTA 127864
Query 378427 CCATCAACATTCTGTTGACC 378446
|| |||||| ||| || ||
Sbjct 127863 CCCTCAACAGACTGCTGTCC 127844
Score = 84.2 bits (92), Expect = 7e-11
Identities = 101/137 (74%), Gaps = 3/137 (2%)
Strand=Plus/Minus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| ||||||||| |||| || ||| || || | ||||| ||||| |||||||||||
Sbjct 128853 CGCGGCACACCAAGTGTGACGTTC---TTGGACGACACACCGGCAAAATGGAAAGTATTG 128797
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | || |||| |||||||| || || || || |||| || || ||||| ||
Sbjct 128796 AGCGTCATCTGCGTAGCAGGCTCACCGATAGATTGGGCGGCAAGAATACCGACCATCTCG 128737
Query 377578 CCAGGATTGACAATAGC 377594
|| || ||||| | |||
Sbjct 128736 CCGGGGTTGACCAGAGC 128720
>seq61
Length=176788
Score = 84.2 bits (92), Expect = 7e-11
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
|| || || || || || || | || || ||||| || || || || |||||||||||
Sbjct 115882 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 115941
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
|| || ||||| || ||||||||||| || || || || || || | || ||||| ||
Sbjct 115942 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 116001
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
|| | ||| || | || || ||||| || | ||||| || ||
Sbjct 116002 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 116045
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515251468456253
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |