Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20verrucosus_20[genbank_20GCA_5F001662655.1_202016- 06-24] 151 sequences; 30,174,856 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq21 219 5e-52 >seq21 Length=459134 Score = 219 bits (242), Expect = 5e-52 Identities = 482/716 (67%), Gaps = 30/716 (4%) Strand=Plus/Minus Query 53243 GAGACGTACGACTTAATGAG--CCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCA 53300 ||||| ||| || | ||| ||||| ||||| || ||||| | ||||| || |||| Sbjct 141242 GAGACATACAACCTCATGTCTTCCAAA--TACTTCACACACGCTTCCCCAACACTCTTCA 141185 Query 53301 ACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACT 53360 | |||||||| || | ||| ||||| ||||||| |||| | |||||||| || Sbjct 141184 ATGCTGGTACACCACAGGCCCAGCTGTCGTCCTGCTTCTTGGTCGACATGAAGGAGGATA 141125 Query 53361 CGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTG 53420 || || || ||||| || || |||||| |||||| ||||| ||| | || | Sbjct 141124 GCATTGAGGGTATCTATGACACACTCAAGACTTGTGCCATGATCTCAAAGACTGCTGGAG 141065 Query 53421 GTATCGG------TATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGA 53474 ||||||| ||||||| || | ||||||| | || || || || | Sbjct 141064 GTATCGGATTGAATATCCAC----CGTA--TCCGTGCCACTGGTGCATACATTGCCGGTA 141011 Query 53475 CGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGT 53534 | ||||| | | | || || || |||||||||||||| ||||||||||| || ||| Sbjct 141010 CCAACGGAAACTCGAACGGCATTGTCCCTATGCTCCGCGTGTTCAACAACACCGCAAGGT 140951 Query 53535 ACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGC 53594 |||| |||| ||||| |||||| || | |||||||||||| | ||||| |||| Sbjct 140950 ACGTTGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTTGAGCCATGGC 140891 Query 53595 ACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCT 53654 |||| || | | ||||| || || || | ||| || || | || || | || Sbjct 140890 ACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGCAAGGAGGAAGTCCGTG 140831 Query 53655 GCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAG 53713 ||||||| |||| ||| ||||| ||||||||||| ||||||||| | || |||||| Sbjct 140830 CCCGTGACTTGTTCTAC-GCTCTCTGGATTCCGGATCTCTTCATGAAGCGTGTCGAGAAG 140772 Query 53714 GACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGT 53773 ||| || ||| ||| |||||||| ||||| ||||| || | | ||| ||||| Sbjct 140771 AACGGCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCAGATGTTTACGGC 140712 Query 53774 GAGGAGTTTAACGAGATGTA-TCGGAC-----GTACGCAGTTCAGGGCCGCTACAAGAAG 53827 || ||||| | | | | || || | | | | | | |||| ||| ||| Sbjct 140711 GATGAGTTCGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGGTCGC------AAG 140658 Query 53828 AAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACG 53887 | ||||||| | || | ||| | | || ||| || ||| ||||| |||| Sbjct 140657 ACTATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACTGAGACAGGAAAC 140598 Query 53888 CCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 || | ||||| ||||||||| | |||| |||||||||||||||||| |||| Sbjct 140597 CCTTTCATGTTGTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 140542 Score = 118 bits (130), Expect = 1e-21 Identities = 302/450 (67%), Gaps = 15/450 (3%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 ||||||||||||||||| || || ||||| || || || || | |||||| | ||| | Sbjct 140021 CGCAACTCCCTGCTCGTCGCACCCATGCCCACTGCCTCCACCTCCCAGATCCTCGGCTTC 139962 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| |||||||| ||||| | ||||||||| |||||| ||| || || ||| Sbjct 139961 AACGAGTGCTTCGAGCCATACACCTCGAACATCTACTCGCGCCGTGTCCTGGCCGGCGAG 139902 Query 55604 TTTGTCATGATCAACAAGCACCTCG----TCAAGGACCTGCAGAAGATCAACAAGTGGAA 55659 || || | || ||| | ||| | |||||||||| | || ||| Sbjct 139901 TT--CCAAG-TCGTCAA-CCCCTGGTTGCTCAAGGACCTCGTCGACATGGGTCTCTGGTC 139846 Query 55660 CCCGCAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGA--ATCTGGAGA 55715 | | || |||| || || | ||| | |||| || ||| |||||| ||| | Sbjct 139845 CGACAACATGAAGAACCGCATCAT-TGCAG-ACGGCGGCTCCATCCAGAACATCCCCAAC 139788 Query 55716 TTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTG 55774 ||| | || | |||||| | ||| ||| || |||||||| | ||| | | Sbjct 139787 ATCCCCGCCGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGCACCATC 139728 Query 55775 ATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTC 55834 | | ||| || || || ||||| | |||||| || |||||||| || |||||| | Sbjct 139727 GTCCAGATGGCCGCCGACCGCGGTGCCTTCATCGATCAATCCCAGTCCCTCAACATCCAC 139668 Query 55835 ATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGA 55894 ||| || | || || ||| |||| | | || ||||||||| ||| |||||| || Sbjct 139667 ATGAAGGACCCGACAATGGGCAAGATCACATCCATGCACTTTGCCGGCTGGAAGCTCGGC 139608 Query 55895 CTCAAGACGGGTATGTACTATCTGCGGACC 55924 |||||||| || |||||||| || || ||| Sbjct 139607 CTCAAGACCGGAATGTACTACCTCCGCACC 139578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214967129800