Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20verrucosus_20[genbank_20GCA_5F001662655.1_202016- 06-24] 151 sequences; 30,174,856 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq36 107 2e-18 seq23 89.7 4e-13 >seq36 Length=342305 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| ||| || || || || ||||| | ||| || || | || || Sbjct 275759 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 275700 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || || ||||||||||| | ||| | | ||| |||||| | Sbjct 275699 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGG 275640 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || |||| | | | |||||| ||||||||| || | |||||| | || Sbjct 275639 ATCTTGGACTTGACATTGTCGATAGTATCGGACGACTCCACCTCAAGGGTGATAGTCTTG 275580 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||||| || || || ||||||||||| Sbjct 275579 CCCGTCAGGGTCTTCACGAAGATTTGCAT 275551 >seq23 Length=411311 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || || ||| || || || || || |||| || || || |||| || Sbjct 115383 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCC 115324 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| |||||||| || || || ||||||||||| | || | || ||| |||||| | Sbjct 115323 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 115264 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || ||| || | | | | || ||| |||||| || |||| ||||| | || Sbjct 115263 ATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 115204 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || || || ||||| ||||| Sbjct 115203 CCCGTGAGGGTCTTGACGAAGATCTGCAT 115175 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||||||||| ||| || || || || || || | || || || | || || ||||| Sbjct 115834 ATGTAGCGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCCTCGAGCTG 115775 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGT-CGGTGGGCACGCTCTCTTTGTCCATGATTT 39199 |||||||| || || || |||||||||| ||||||| | || ||| || || ||| | Sbjct 115774 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG-ATGCCCTCCTTATCTTGGATCT 115716 Query 39200 TCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCG 39259 | |||| | | | ||||| |||||| || || | ||| || | ||||| | Sbjct 115715 TAGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCTAGCGTAATTGTCTTTCCGG 115656 Query 39260 TCAGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| ||||||||||| Sbjct 115655 TGAGGGTCTTAACGAAGATTTGCAT 115631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429544809501863