Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20verrucosus_20[genbank_20GCA_5F001662655.1_202016- 06-24] 151 sequences; 30,174,856 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq23 93.3 3e-14 >seq23 Length=411311 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||||||||| || || |||||| | || ||||| || | Sbjct 115175 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 115234 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || || ||||| || || | || || || || Sbjct 115235 GACACCATCGACAATGTGAAGTC-GAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 115293 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || || ||||| || ||||| |||| |||||| | ||| ||||| Sbjct 115294 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTGGAGGACGGTCGCACTCTCTCCGACTACAA 115353 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 115354 CATTCAGAAGGAGTCGAC 115371 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||| | || ||||| || || |||||||| ||||| || || Sbjct 115859 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATTACTCTCGAGGTTGAGTCTTCG 115918 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || ||| || || || ||| | || || || || Sbjct 115919 GACACCATTGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAG 115978 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || || ||||| || || || || | | || | |||| |||||| Sbjct 115979 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGGAGGACGCTGAGCGACTACAAC 116038 Query 23791 ATACAAAAAGAG 23802 || ||||| ||| Sbjct 116039 ATCCAAAAGGAG 116050 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || || |||||||| ||||| || || || || || || | Sbjct 115403 ATGCAGATTTTTGTCAAGACTCTTACGGGAAAGACGATTACGCTTGAGGTGGAATCATCC 115462 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | || || ||| ||||| || ||| | || || || || Sbjct 115463 GATACCATTGATAACGTCAAGTCGAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCAG 115522 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || |||||||| || || |||| || | ||||| | || |||||| Sbjct 115523 CAGCGCCTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGCACCCTGTCGGACTACAAC 115582 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || ||||| || | ||||| ||| Sbjct 115583 ATTCAGAAGGAGTCGACCCTGCATTTGGTT 115612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008977956708