Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20verrucosus_20[genbank_20GCA_5F001662655.1_202016-
06-24] 151 sequences; 30,174,856 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq23 93.3 3e-14
>seq23
Length=411311
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||||||||| || || |||||| | || ||||| || |
Sbjct 115175 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 115234
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || || ||||| || || | || || || ||
Sbjct 115235 GACACCATCGACAATGTGAAGTC-GAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 115293
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || || || ||||| || ||||| |||| |||||| | ||| |||||
Sbjct 115294 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTGGAGGACGGTCGCACTCTCTCCGACTACAA 115353
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 115354 CATTCAGAAGGAGTCGAC 115371
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||| | || ||||| || || |||||||| ||||| || ||
Sbjct 115859 ATGCAGATTTTCGTCAAGACCTTGACCGGAAAGACCATTACTCTCGAGGTTGAGTCTTCG 115918
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || || ||| || || || ||| | || || || ||
Sbjct 115919 GACACCATTGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAG 115978
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || || || ||||| || || || || | | || | |||| ||||||
Sbjct 115979 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGGAGGACGCTGAGCGACTACAAC 116038
Query 23791 ATACAAAAAGAG 23802
|| ||||| |||
Sbjct 116039 ATCCAAAAGGAG 116050
Score = 82.4 bits (90), Expect = 5e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || || || |||||||| ||||| || || || || || || |
Sbjct 115403 ATGCAGATTTTTGTCAAGACTCTTACGGGAAAGACGATTACGCTTGAGGTGGAATCATCC 115462
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || |||| | | || || ||| ||||| || ||| | || || || ||
Sbjct 115463 GATACCATTGATAACGTCAAGTCGAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCAG 115522
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || |||||||| || || |||| || | ||||| | || ||||||
Sbjct 115523 CAGCGCCTGATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGCACCCTGTCGGACTACAAC 115582
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820
|| || || ||||| || | ||||| |||
Sbjct 115583 ATTCAGAAGGAGTCGACCCTGCATTTGGTT 115612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338008977956708
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |