Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq17 230 3e-55 seq12 89.7 6e-13 >seq17 Length=408792 Score = 230 bits (254), Expect = 3e-55 Identities = 1301/2062 (63%), Gaps = 46/2062 (2%) Strand=Plus/Plus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||| || || ||||| | || | | || | || |||||||| || || || || Sbjct 104640 GTGAACTGGATAGGAGCAGCAGCAGCCTGGGTTCTCAGGTAGTACATGCCTGTCTTCAGT 104699 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927 || || |||| ||| || ||||| || || | ||| | || ||| || Sbjct 104700 CCAAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGTGGGGTCTTTCATG 104759 Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 ||||| |||| ||| || || || |||||||| || | || || ||||| | | | Sbjct 104760 TGGATGTTCAGAGACTGGGACTGGTCAATGAAGGCGCCACGATCGGCGGCCATCTGAACG 104819 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047 | ||| | |||| |||||||||| || || || | ||| | || | |||| Sbjct 104820 ACGGTCCTCTGTGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGACTTCGGCGGGAATA 104879 Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104 || | | ||||||| || || || | ||||| | |||||| || | ||| | Sbjct 104880 TTGGGGATGTTCTGAACGGAACCGTTCTCGGCAATAATACGATTCTTCATGTTGTCAGAC 104939 Query 53105 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 53164 || | | ||| | | | ||||| || || || || || || || ||| Sbjct 104940 CAGAGACCCATGTCGACCAGGTCCTTGAGGAGCCAGGGGTTGACAACCTGGAAATCGCCA 104999 Query 53165 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 53224 | || || | |||| |||||| || || || || || | ||||||| || ||| Sbjct 105000 GCCAGAACACGACGAGAGTAAATGTTGGACGTGTAGGGCTCGAAGCACTCATTGTTGCCC 105059 Query 53225 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 53284 | || |||| || || ||||| ||||| || |||| ||| || || || | || ||| Sbjct 105060 AGGATCTGAGAGGTGGAAGCAGTAGGCATGGGCGCCATCAACAAGCTGTTGCGAATACC- 105118 Query 53285 TATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 53342 |||||| |||| | | |||| || | ||||||| ||| || || || || ||| Sbjct 105119 -ATGTTCCTTGATCTGAGCTTTCAGTGACTCCCAATCCCAGAGGTCAGATGGAGTAACGT 105177 Query 53343 NNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATG 53402 || || ||||| || | | || ||| | || || ||| | Sbjct 105178 TCCACATGTCATACTGGAGGATACCCTTGGAGACAGGAGAGCCTTCGTAGGTGGAGTAGG 105237 Query 53403 GTCCTTCCTTCTCAGCTAG-TTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCG 53461 | || | || | || || |||| | || |||||| | | || | ||| ||| Sbjct 105238 GACCCTGCTCTTTGGCGAGGTTCATGGAGGCCGTC-AATGCAGCATGGTAGAGGGTCTCG 105296 Query 53462 AAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGG-ATAATTTAAGAGAAT 53520 ||||||| ||| || || | | || || | || || || || || || Sbjct 105297 AAGATCTGCTTGTTCAGCTGTCTGGCCTCTGGTGACTCGAAGGGCATGCGGAGAGCCAAG 105356 Query 53521 AAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGAT 53580 ||| ||||| || | || || ||||||| ||| | ||||| |||| | |||| | | Sbjct 105357 AAA-GCGTCAGCAAGACCCTGGACACCAAGACCAACAGGTCGGTGTCGCATATTGCTGTT 105415 Query 53581 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAAT 53640 || || || | ||| || | || | || ||||| || || || || | |||| Sbjct 105416 CCGTGCCTCAGGTACAGGGTAGTGGTTGACGTCGATAATCTTGTTCAGATTGCGAACAAC 105475 Query 53641 TACTT---TGACCACATCCTTCAGTTTGAGAAAATCAAAT-TGTCCA---TCTATT--AC 53691 || | ||||| ||| || || |||| ||| | || || | || | || Sbjct 105476 GACCTGTGTGACCTCATGA---AGCTTCTGAAAGTCATACGTGCCCGAGTTGTAATCAAC 105532 Query 53692 AAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-T 53750 ||| | ||| || || |||||||| || || || || ||||||| || | | ||| | Sbjct 105533 GAACGAGGGCAAAGCCATGGATGCCAGGTTGCACACAGCAACCTCATCAGGAGC-GCAGT 105591 Query 53751 ATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTAC 53810 | | || ||||| ||||||||||| | |||||| || | || | || || | Sbjct 105592 ACTCGATGATCTCTGTGCAAAGATTGGAGCTGCGGATGGTGCCAAGGTTCTTCTGGTTGC 105651 Query 53811 TCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATT 53870 |||| ||| || |||||| || || || || || ||||||| || |||| | | Sbjct 105652 TCTTGCGGTTGCAGTGATCCTTGTAGAGCATAAAAGGGTTACCAGTCTCGGTCTGCGCCT 105711 Query 53871 CTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT- 53929 | | || || | ||||| | ||||| || || ||| | | | ||| Sbjct 105712 CGAGGATGGCATACCAGAGCTTCTGGGCCTTGATC---GACTTGC--CGCGTCCCTCGGC 105766 Query 53930 -TCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACA 53988 |||||| |||| || ||||| || || | |||| ||| ||||| || Sbjct 105767 CTCGTATTTCTCGTACAGAGCCTCGAACTCATCGCCGTAGACATCAGCCAGACCAGGGCA 105826 Query 53989 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 54048 |||| || ||||| || | ||| || |||| || ||||| ||||| |||||||| Sbjct 105827 CTCATTGGGGCACATTAAAGTCCAGTCGCCGTTTCTCTCGACTCGCTTCATGAAGAGATC 105886 Query 54049 AGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 54108 ||||||||||||||| | || ||||| | | | |||||| || || ||||| Sbjct 105887 AGGAATCCAAAGAGCGAGGAAAAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTT 105946 Query 54109 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAAC 54168 ||||| || ||| | | | ||| | ||||| || || | ||| || | | | Sbjct 105947 ACGGAGATCAAGAAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATAGCGAAGGC 106006 Query 54169 TCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 54228 || || || ||||| || |||||||| | |||||| || ||||| || | || | || Sbjct 106007 ACCGGGACGCTTGTTGCCACCCTGATCGACGTATCTCGCAGTGTTGTTGAAGACACGCAG 106066 Query 54229 CATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACG 54288 ||| || | ||| || || |||| || || || || | || || ||| | ||||| Sbjct 106067 CATGGGGACAATGCCGTTTGATGTTCCGTTCGTGCCAGCAATGTAAGAACCAGTCGCACG 106126 Query 54289 AATATTACTA--ATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGT 54346 ||| | | |||| || || || || |||||||| || ||||| | || || Sbjct 106127 AATGCGATGAACATTG--AGGCCAATGCCACCTGCCATCTTTGAGATCATGGCACAGGTC 106184 Query 54347 TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTA 54406 || | || |||||||| ||||| || || || ||| |||||| | ||||| ||| | Sbjct 106185 TTCAGGGTGTCATAGATACCCTCGATGCTGTCCTCCTTCATGTCGACCAGAAAGCAGGAA 106244 Query 54407 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 54466 |||| |||| || ||| || ||||| || | || ||||| || || || || | Sbjct 106245 GACAGTTGGGCCTGAGGAGTACCAGCATTGAAGAGTGTGGGAGATGCATGTGTGAAGTAC 106304 Query 54467 TTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTG--ATGAATTC 54524 || ||| | || |||||||||||||| | || | || ||| | || | Sbjct 106305 TTGCTAGACATGAGGTTGTACGTCTCGATGACCCTTTCGACAT--CATCGCCCCAGATAC 106362 Query 54525 CTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCA 54584 | || || |||||||| | ||| ||||| || | ||| | || ||| ||| | |||| Sbjct 106363 CAACAGCAACACGCATAATCATATGCTGCGGCCGCTCAGCAATTTTGCCGTTGAGCTTCA 106422 Query 54585 GCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTC 54642 | | ||| ||| |||| || || || ||||| || | ||| ||||| ||||| || Sbjct 106423 GGAGGTATGATCGCTCCAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAA--TCTCGATC 106480 Query 54643 GTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATC-CATGGTAATAC 54701 || | ||| |||||| |||| ||||| | || | || || ||| | | Sbjct 106481 ATAGACAATGGCTGAGTCAAGTTCCTCCTTGTGCTTCATGACCGAGTCATATGTTTGT-T 106539 Query 54702 TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCA 54761 || || || || || | || || || || |||||||||| ||| ||| | | Sbjct 106540 GGGAGATCATAGGCGAGGGCTTATTGTTCTTGGGGTTGACATAGTGGTATAGATCGCTTA 106599 Query 54762 TCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGG 54821 ||| | || | || ||||||| ||||| || || |||||||| || | || | Sbjct 106600 CGACTGAAGACCATTGCTTCTTTGTTTGCTTGTGAAGGTTGGATACGGCAATGCGGGCCG 106659 Query 54822 CTAGAATGGCATAATCCGGATG 54843 | ||||||||||| || || || Sbjct 106660 CAAGAATGGCATAGTCTGGGTG 106681 >seq12 Length=3698523 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/218 (69%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| || || || |||||| ||| ||||| ||||| | | ||| | ||||||||| Sbjct 322526 AACAGTAAGCAGGCAAAATCGGTGTGCAGACCTTCGTCGCGAGAAATGAGCTCGTTGGAA 322467 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || || | |||||||| || || ||||| || | ||| || || || || || | ||| Sbjct 322466 AAGGTCAAGCCGGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGATGCGAAAGCACCA 322407 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG--- 24302 ||||| ||||| || || || || |||||||| || | | | | || | Sbjct 322406 CTGAAGAAGATTCCCTCAACGGCGGCGAAGGCAATGAGACGCTGGGCGAAGGTGGAGTTC 322347 Query 24303 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 24340 |||| |||||||| ||||||| ||||||||||| Sbjct 322346 TTGTCGGCGATCCACTTCAGAGCCCAGTCGGCCTTCTT 322309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721325403760