Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq37 98.7 8e-16 seq23 95.1 1e-14 >seq37 Length=2347807 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| |||| ||| ||| || || ||||| ||||| | Sbjct 2330424 CCTCCACGCAGTCGGAGAACCAAGTGCAGGGTGCTCTCTTTCTGGATGTTGTAGTCAGAG 2330483 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||||||||| || || ||| |||| || | ||||||||| || Sbjct 2330484 AGAGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGGCGCTGCTGGTCAGGAGGA 2330543 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| ||||| || ||||| ||||| | ||| ||| || | ||| | Sbjct 2330544 ATGCCCTCCTTATCCTGAATCTTCGACTTCACATTATCGATAGTGTCCGACGACTCGACT 2330603 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||||||||| | || ||||| || |||||||| Sbjct 2330604 TCTAGGGTGATAGTCTTGCCGGTAAGGGTCTTGACGAAAATTTGCAT 2330650 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| |||| || || | || | || ||||||||||||||||| ||||||| | Sbjct 2331108 CCACCTCGAAGCCGAAGGACAAGGTGGAGGGTCGACTCCTTTTGAATGTTGTAGTCCGAC 2331167 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || || ||||||| || || ||||| ||| | ||||| | |||||| || ||| Sbjct 2331168 AAAGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATAAGGCGCTGCTGATCGGGGGGG 2331227 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| || || | ||| Sbjct 2331228 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCGACC 2331287 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||| ||||| | ||||| || || || ||||| Sbjct 2331288 TCGAGAGTGATGGTCTTCCCGGTGAGGGTTTTCACGAAGATCTGCAT 2331334 >seq23 Length=3455761 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || || ||||| | ||| | ||| |||||| || ||||| ||||| | Sbjct 479356 CCTCCACGGAGTCTCAGCACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 479415 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||| ||||| ||||| || |||| | || |||||||||| ||| Sbjct 479416 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCCGGGGGG 479475 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | | | || || | | |||| Sbjct 479476 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTCGACTCCACC 479535 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || |||||||| || | || || || || || ||||| Sbjct 479536 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 479582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259009587492