Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomassariella_20vexata_20[genbank_20GCA_5F002105095.1_202017-04- 20] 37 sequences; 44,711,451 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq12 167 2e-36 seq23 141 1e-28 seq37 120 3e-22 seq34 102 8e-17 >seq12 Length=3698523 Score = 167 bits (184), Expect = 2e-36 Identities = 310/450 (69%), Gaps = 4/450 (1%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| ||| |||||||||| || | || |||||| | |||| | Sbjct 322310 AGAAGGCCGACTGGGCTCTGAAGTGGATCGCCGACAAGAACTCCACCTTCGCCCAGCGTC 322369 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | | |||||||| ||||| ||||| ||||||| || |||||| | || || | Sbjct 322370 TCATTGCCTTCGCCGCCGTTGAGGGAATCTTCTTCAGTGGTGCTTTCGCATCTATCTTCT 322429 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 || | ||||| ||||| || ||||||||| |||| || |||||||||||| || | | Sbjct 322430 GGTTGAAGAAGCGCGGTCTTATGCCCGGCTTGACCTTTTCCAACGAGCTCATTTCTCGCG 322489 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 |||| |||||||| ||| |||||||| || |||||| ||| || ||| || || Sbjct 322490 ACGAAGGTCTGCACACCGATTTTGCCTGCTTACTGTTCTCCCATCTGAAGCACCGTCCTG 322549 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || || | || || || || |||||| ||| ||||| || ||| | | Sbjct 322550 GCAAGGATGTCATCGAGGCTGTCATCGTCGACGCTGTCAAGATCGAACAAGAATTCTTGA 322609 Query 117282 CCGAAGCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339 ||||||| |||| |||| ||| || || | || ||| | | ||| ||| || || Sbjct 322610 CCGAAGCCTTGCCTTGTGC-TCTTCTTGGCATGAA-CGCGGATCTCATGAAGCAGTATAT 322667 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 |||||| || |||||| | || ||| ||| || | | || |||| |||| || | Sbjct 322668 CGAGTTTGTTGCCGACCGTCTCCTGGTCGCCCTTGGCAACGACAAGGTCTACCGTTCGTC 322727 Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTC 117429 ||||| | ||||| ||| | |||||| Sbjct 322728 AAACCCCTTCGACTTCATGGAGAACATCTC 322757 Score = 156 bits (172), Expect = 4e-33 Identities = 206/285 (72%), Gaps = 3/285 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||| | ||||||| | |||||| Sbjct 321903 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGACCTG 321962 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGA---ACGACAACGAGCGCCATTTCATCAAG 116752 |||||||||| | ||||||| | | || | || | ||| |||||| Sbjct 321963 TCCAAGGACATGCACGACTGGAACAACAAGATTAATGAAGATGAGAAGTTCTTCATCTCC 322022 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || || || || ||||| || ||||| ||||||||||| ||||||||||| Sbjct 322023 CACATTCTTGCTTTCTTTGCCGCGTCAGATGGCATTGTCAACGAGAACCTGGTCGAGCGC 322082 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| || || ||| | |||| || || |||||||||||||| |||||| ||| Sbjct 322083 TTCAGCGGCGAAGTCCAGATCCCCGAAGCTCGATGCTTCTACGGCTTCCAGATCATGATG 322142 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||||| | ||||| || | || ||| ||||| ||||| ||| Sbjct 322143 GAGAACATTCACTCCGAGACCTACTCGTTGCTCATTGACACCTAC 322187 >seq23 Length=3455761 Score = 141 bits (156), Expect = 1e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || |||||| | || || || | | | Sbjct 479582 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 479523 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| || ||||||||| |||||||| Sbjct 479522 GACACCATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAG 479463 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | || | ||| ||||| ||||| || || | ||||| ||| |||||||||| Sbjct 479462 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTACAAC 479403 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||||||||||| ||| || ||||| ||| || Sbjct 479402 ATCCAGAAGGAGAGCACCCTCCATCTCGTGCTG 479370 >seq37 Length=2347807 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| ||||| ||||| ||||| ||| |||| ||||| || | Sbjct 2331106 ATGCAGATCTTCGTTAAAACTCTCACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCT 2331047 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || |||| || || ||||| |||||| | ||||| Sbjct 2331046 GATACCATTGACAACG-TCAAGTCGAAGATTCAAGATAAGGAGGGTATCCCCCCAGACCA 2330988 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || ||||| || || || || | |||||||| ||||||||| Sbjct 2330987 GCAGCGCCTAATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTTCCGACTACAA 2330928 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||| || ||| || || || || Sbjct 2330927 CATTCAGAAAGAAAGCACACTTCACCTTGT 2330898 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| ||||| || || |||||||| |||| ||||| | || Sbjct 2331334 ATGCAGATCTTCGTGAAAACCCTCACCGGGAAGACCATCACTCTCGAGGTCGAGTCTTCC 2331275 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| |||||||||||| | || || Sbjct 2331274 GACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCA 2331216 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || ||||| || || || |||| ||||| | |||||||| Sbjct 2331215 GCAGCGCCTTATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACTTTGTCGGACTACAA 2331156 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| || |||||| | || || || || || Sbjct 2331155 CATTCAAAAGGAGTCGACCCTCCACCTTGT 2331126 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || |||||| | || ||||| | | Sbjct 2330650 ATGCAAATTTTCGTCAAGACCCTTACCGGCAAGACTATCACCCTAGAAGTCGAGTCGTCG 2330591 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || |||| || || |||||||| || | |||||| Sbjct 2330590 GACACTATCGATAATGTGAAGTCGAAGATTCAGGATAAGGAGGGCATTCCTCCTGACCAG 2330531 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||| | || || || |||||||| |||| ||||| ||| ||||||||| Sbjct 2330530 CAGCGCCTCATTTTTGCCGGAAAGCAGCTGGAGGACGGCCGCACTCTCTCTGACTACAAC 2330471 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| ||| ||| ||||| Sbjct 2330470 ATCCAGAAAGAGAGCACCCTGCA 2330448 Score = 82.4 bits (90), Expect = 8e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||| || || || || ||||| || |||||| | || ||||| | | Sbjct 2330879 AATGCAAATTTTCGTCAAGACCCTTACCGGCAAGACTATCACCCTAGAGGTCGAGTCGTC 2330820 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | ||| || || | || || |||||||| || | || || Sbjct 2330819 GGACACTATCGATAATGTGAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCAGATCA 2330760 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || ||||| || || || || | |||||||| |||||||| Sbjct 2330759 GCAGCGCCTTATCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTTCTGACTACAA 2330700 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||| || ||| || || || || Sbjct 2330699 CATTCAGAAAGAAAGCACCCTTCACCTTGT 2330670 >seq34 Length=2752027 Score = 102 bits (112), Expect = 8e-17 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| | || || || | |||| | | | Sbjct 472414 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCCGATACCATC 472473 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| |||||||| ||| | |||||||| || || Sbjct 472474 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCCTG 472533 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || || | || || || |||||||||||| |||||| Sbjct 472534 ATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTTTCCGACTACAACATTCAGAAG 472593 Query 40879 G 40879 | Sbjct 472594 G 472594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218961711120